Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SND1-IT1Q9HBX3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SND1-IT1Q9HBX3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC14.67□□□□□ -0.06
SND1-IT1Q9HBX3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SND1-IT1Q9HBX3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SND1-IT1Q9HBX3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SND1-IT1Q9HBX3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SND1-IT1Q9HBX3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
SND1-IT1Q9HBX3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SND1-IT1Q9HBX3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SND1-IT1Q9HBX3 AC011551.1-201ENST00000614101 683 ntBASIC14.67□□□□□ -0.06
SND1-IT1Q9HBX3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SND1-IT1Q9HBX3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SND1-IT1Q9HBX3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SND1-IT1Q9HBX3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SND1-IT1Q9HBX3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SND1-IT1Q9HBX3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC14.67□□□□□ -0.06
SND1-IT1Q9HBX3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SND1-IT1Q9HBX3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SND1-IT1Q9HBX3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SND1-IT1Q9HBX3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SND1-IT1Q9HBX3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SND1-IT1Q9HBX3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC14.66□□□□□ -0.06
SND1-IT1Q9HBX3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
SND1-IT1Q9HBX3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SND1-IT1Q9HBX3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
SND1-IT1Q9HBX3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SND1-IT1Q9HBX3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC14.66□□□□□ -0.06
SND1-IT1Q9HBX3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SND1-IT1Q9HBX3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SND1-IT1Q9HBX3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC14.66□□□□□ -0.06
SND1-IT1Q9HBX3 MIR4449-201ENST00000578365 66 ntBASIC14.66□□□□□ -0.06
SND1-IT1Q9HBX3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SND1-IT1Q9HBX3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SND1-IT1Q9HBX3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC14.66□□□□□ -0.06
SND1-IT1Q9HBX3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SND1-IT1Q9HBX3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SND1-IT1Q9HBX3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SND1-IT1Q9HBX3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SND1-IT1Q9HBX3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
SND1-IT1Q9HBX3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SND1-IT1Q9HBX3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SND1-IT1Q9HBX3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SND1-IT1Q9HBX3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
SND1-IT1Q9HBX3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SND1-IT1Q9HBX3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SND1-IT1Q9HBX3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC14.65□□□□□ -0.06
SND1-IT1Q9HBX3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
SND1-IT1Q9HBX3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SND1-IT1Q9HBX3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SND1-IT1Q9HBX3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
SND1-IT1Q9HBX3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SND1-IT1Q9HBX3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SND1-IT1Q9HBX3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
SND1-IT1Q9HBX3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 LONRF2P2-201ENST00000439212 571 ntBASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 DUX4L9-201ENST00000449051 1259 ntBASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 RNF126P1-201ENST00000567452 1320 ntBASIC14.64□□□□□ -0.07
SND1-IT1Q9HBX3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SND1-IT1Q9HBX3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SND1-IT1Q9HBX3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SND1-IT1Q9HBX3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC14.63□□□□□ -0.07
SND1-IT1Q9HBX3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SND1-IT1Q9HBX3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SND1-IT1Q9HBX3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC14.63□□□□□ -0.07
SND1-IT1Q9HBX3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.63□□□□□ -0.07
SND1-IT1Q9HBX3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SND1-IT1Q9HBX3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC14.63□□□□□ -0.07
SND1-IT1Q9HBX3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms