Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PIF1Q9H611 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PIF1Q9H611 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PIF1Q9H611 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PIF1Q9H611 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.93■□□□□ 0.94
PIF1Q9H611 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.93■□□□□ 0.94
PIF1Q9H611 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PIF1Q9H611 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PIF1Q9H611 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PIF1Q9H611 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.92■□□□□ 0.94
PIF1Q9H611 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PIF1Q9H611 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PIF1Q9H611 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PIF1Q9H611 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PIF1Q9H611 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PIF1Q9H611 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PIF1Q9H611 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.91■□□□□ 0.94
PIF1Q9H611 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PIF1Q9H611 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
PIF1Q9H611 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PIF1Q9H611 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PIF1Q9H611 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PIF1Q9H611 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PIF1Q9H611 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PIF1Q9H611 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PIF1Q9H611 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PIF1Q9H611 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PIF1Q9H611 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PIF1Q9H611 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PIF1Q9H611 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
PIF1Q9H611 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.9■□□□□ 0.94
PIF1Q9H611 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PIF1Q9H611 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.9■□□□□ 0.94
PIF1Q9H611 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PIF1Q9H611 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.9■□□□□ 0.94
PIF1Q9H611 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PIF1Q9H611 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PIF1Q9H611 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PIF1Q9H611 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PIF1Q9H611 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PIF1Q9H611 AL024507.2-201ENST00000606070 2574 ntBASIC20.9■□□□□ 0.94
PIF1Q9H611 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PIF1Q9H611 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PIF1Q9H611 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PIF1Q9H611 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.89■□□□□ 0.93
PIF1Q9H611 AC144652.1-201ENST00000609974 1624 ntBASIC20.89■□□□□ 0.93
PIF1Q9H611 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PIF1Q9H611 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.89■□□□□ 0.93
PIF1Q9H611 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.88■□□□□ 0.93
PIF1Q9H611 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PIF1Q9H611 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PIF1Q9H611 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PIF1Q9H611 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.88■□□□□ 0.93
PIF1Q9H611 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PIF1Q9H611 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PIF1Q9H611 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.87■□□□□ 0.93
PIF1Q9H611 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.87■□□□□ 0.93
PIF1Q9H611 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PIF1Q9H611 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PIF1Q9H611 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PIF1Q9H611 YBX1P4-201ENST00000392794 808 ntBASIC20.87■□□□□ 0.93
PIF1Q9H611 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.87■□□□□ 0.93
PIF1Q9H611 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PIF1Q9H611 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.86■□□□□ 0.93
PIF1Q9H611 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PIF1Q9H611 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PIF1Q9H611 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PIF1Q9H611 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.86■□□□□ 0.93
PIF1Q9H611 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PIF1Q9H611 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PIF1Q9H611 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.86■□□□□ 0.93
PIF1Q9H611 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PIF1Q9H611 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.86■□□□□ 0.93
PIF1Q9H611 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.86■□□□□ 0.93
PIF1Q9H611 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PIF1Q9H611 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PIF1Q9H611 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PIF1Q9H611 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PIF1Q9H611 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PIF1Q9H611 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.85■□□□□ 0.93
PIF1Q9H611 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PIF1Q9H611 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PIF1Q9H611 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PIF1Q9H611 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.85■□□□□ 0.93
PIF1Q9H611 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.85■□□□□ 0.93
PIF1Q9H611 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PIF1Q9H611 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.85■□□□□ 0.93
PIF1Q9H611 AC103834.1-201ENST00000520383 144 ntBASIC20.85■□□□□ 0.93
PIF1Q9H611 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.85■□□□□ 0.93
PIF1Q9H611 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PIF1Q9H611 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PIF1Q9H611 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PIF1Q9H611 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PIF1Q9H611 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PIF1Q9H611 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PIF1Q9H611 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PIF1Q9H611 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PIF1Q9H611 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PIF1Q9H611 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
PIF1Q9H611 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms