Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDT1Q9H211 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.92■■□□□ 1.42
CDT1Q9H211 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.92■■□□□ 1.42
CDT1Q9H211 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
CDT1Q9H211 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CDT1Q9H211 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDT1Q9H211 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDT1Q9H211 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CDT1Q9H211 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.92■■□□□ 1.42
CDT1Q9H211 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDT1Q9H211 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.91■■□□□ 1.42
CDT1Q9H211 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDT1Q9H211 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CDT1Q9H211 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.91■■□□□ 1.42
CDT1Q9H211 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
CDT1Q9H211 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CDT1Q9H211 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CDT1Q9H211 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
CDT1Q9H211 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDT1Q9H211 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CDT1Q9H211 AC026271.2-201ENST00000428091 497 ntBASIC23.91■■□□□ 1.42
CDT1Q9H211 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.91■■□□□ 1.42
CDT1Q9H211 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.91■■□□□ 1.42
CDT1Q9H211 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDT1Q9H211 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
CDT1Q9H211 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDT1Q9H211 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.9■■□□□ 1.42
CDT1Q9H211 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDT1Q9H211 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDT1Q9H211 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CDT1Q9H211 AC068587.7-201ENST00000641602 218 ntBASIC23.9■■□□□ 1.42
CDT1Q9H211 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDT1Q9H211 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDT1Q9H211 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
CDT1Q9H211 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.9■■□□□ 1.42
CDT1Q9H211 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDT1Q9H211 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
CDT1Q9H211 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.42
CDT1Q9H211 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.89■■□□□ 1.42
CDT1Q9H211 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.89■■□□□ 1.42
CDT1Q9H211 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
CDT1Q9H211 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDT1Q9H211 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDT1Q9H211 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.89■■□□□ 1.41
CDT1Q9H211 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.89■■□□□ 1.41
CDT1Q9H211 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.89■■□□□ 1.41
CDT1Q9H211 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.88■■□□□ 1.41
CDT1Q9H211 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
CDT1Q9H211 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.88■■□□□ 1.41
CDT1Q9H211 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CDT1Q9H211 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.88■■□□□ 1.41
CDT1Q9H211 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
CDT1Q9H211 DUSP8P5-201ENST00000422884 1815 ntBASIC23.88■■□□□ 1.41
CDT1Q9H211 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.88■■□□□ 1.41
CDT1Q9H211 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDT1Q9H211 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.88■■□□□ 1.41
CDT1Q9H211 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
CDT1Q9H211 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
CDT1Q9H211 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDT1Q9H211 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDT1Q9H211 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.87■■□□□ 1.41
CDT1Q9H211 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDT1Q9H211 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDT1Q9H211 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
CDT1Q9H211 AC010141.3-201ENST00000456659 717 ntBASIC23.87■■□□□ 1.41
CDT1Q9H211 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.87■■□□□ 1.41
CDT1Q9H211 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.87■■□□□ 1.41
CDT1Q9H211 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.87■■□□□ 1.41
CDT1Q9H211 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
CDT1Q9H211 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDT1Q9H211 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.86■■□□□ 1.41
CDT1Q9H211 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.86■■□□□ 1.41
CDT1Q9H211 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CDT1Q9H211 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDT1Q9H211 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.86■■□□□ 1.41
CDT1Q9H211 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.86■■□□□ 1.41
CDT1Q9H211 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDT1Q9H211 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.86■■□□□ 1.41
CDT1Q9H211 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.86■■□□□ 1.41
CDT1Q9H211 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.86■■□□□ 1.41
CDT1Q9H211 AC012414.1-201ENST00000556676 535 ntBASIC23.86■■□□□ 1.41
CDT1Q9H211 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDT1Q9H211 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.86■■□□□ 1.41
CDT1Q9H211 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.86■■□□□ 1.41
CDT1Q9H211 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDT1Q9H211 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDT1Q9H211 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.85■■□□□ 1.41
CDT1Q9H211 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDT1Q9H211 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.85■■□□□ 1.41
CDT1Q9H211 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDT1Q9H211 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.85■■□□□ 1.41
CDT1Q9H211 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.85■■□□□ 1.41
CDT1Q9H211 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.85■■□□□ 1.41
CDT1Q9H211 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDT1Q9H211 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.84■■□□□ 1.41
CDT1Q9H211 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CDT1Q9H211 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDT1Q9H211 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.84■■□□□ 1.41
CDT1Q9H211 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDT1Q9H211 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms