Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD4Q9H0A8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD4Q9H0A8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD4Q9H0A8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.37■□□□□ 0.69
COMMD4Q9H0A8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.37■□□□□ 0.69
COMMD4Q9H0A8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.37■□□□□ 0.69
COMMD4Q9H0A8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD4Q9H0A8 AC087742.1-201ENST00000575880 1738 ntBASIC19.37■□□□□ 0.69
COMMD4Q9H0A8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
COMMD4Q9H0A8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.36■□□□□ 0.69
COMMD4Q9H0A8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.36■□□□□ 0.69
COMMD4Q9H0A8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.36■□□□□ 0.69
COMMD4Q9H0A8 SNX5-217ENST00000606557 1087 ntBASIC19.36■□□□□ 0.69
COMMD4Q9H0A8 AC012354.3-201ENST00000623734 483 ntBASIC19.36■□□□□ 0.69
COMMD4Q9H0A8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COMMD4Q9H0A8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD4Q9H0A8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
COMMD4Q9H0A8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.35■□□□□ 0.69
COMMD4Q9H0A8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.35■□□□□ 0.69
COMMD4Q9H0A8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.35■□□□□ 0.69
COMMD4Q9H0A8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.35■□□□□ 0.69
COMMD4Q9H0A8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD4Q9H0A8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD4Q9H0A8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD4Q9H0A8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD4Q9H0A8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD4Q9H0A8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
COMMD4Q9H0A8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.35■□□□□ 0.69
COMMD4Q9H0A8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
COMMD4Q9H0A8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD4Q9H0A8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD4Q9H0A8 LINC01529-204ENST00000636474 1715 ntBASIC19.34■□□□□ 0.69
COMMD4Q9H0A8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
COMMD4Q9H0A8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD4Q9H0A8 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.34■□□□□ 0.69
COMMD4Q9H0A8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD4Q9H0A8 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD4Q9H0A8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD4Q9H0A8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD4Q9H0A8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.34■□□□□ 0.69
COMMD4Q9H0A8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.34■□□□□ 0.69
COMMD4Q9H0A8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD4Q9H0A8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
COMMD4Q9H0A8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
COMMD4Q9H0A8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COMMD4Q9H0A8 FBXW4P1-201ENST00000426721 2239 ntBASIC19.33■□□□□ 0.69
COMMD4Q9H0A8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.33■□□□□ 0.69
COMMD4Q9H0A8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
COMMD4Q9H0A8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COMMD4Q9H0A8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COMMD4Q9H0A8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COMMD4Q9H0A8 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
COMMD4Q9H0A8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COMMD4Q9H0A8 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.33■□□□□ 0.68
COMMD4Q9H0A8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.33■□□□□ 0.68
COMMD4Q9H0A8 MIR4508-201ENST00000584178 70 ntBASIC19.33■□□□□ 0.68
COMMD4Q9H0A8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.33■□□□□ 0.68
COMMD4Q9H0A8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.33■□□□□ 0.68
COMMD4Q9H0A8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
COMMD4Q9H0A8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.33■□□□□ 0.68
COMMD4Q9H0A8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
COMMD4Q9H0A8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
COMMD4Q9H0A8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COMMD4Q9H0A8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD4Q9H0A8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.32■□□□□ 0.68
COMMD4Q9H0A8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD4Q9H0A8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD4Q9H0A8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.32■□□□□ 0.68
COMMD4Q9H0A8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD4Q9H0A8 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD4Q9H0A8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD4Q9H0A8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD4Q9H0A8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COMMD4Q9H0A8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COMMD4Q9H0A8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
COMMD4Q9H0A8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
COMMD4Q9H0A8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.31■□□□□ 0.68
COMMD4Q9H0A8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COMMD4Q9H0A8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COMMD4Q9H0A8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
COMMD4Q9H0A8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
COMMD4Q9H0A8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COMMD4Q9H0A8 FP325331.1-202ENST00000623531 1380 ntBASIC19.31■□□□□ 0.68
COMMD4Q9H0A8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COMMD4Q9H0A8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COMMD4Q9H0A8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.3■□□□□ 0.68
COMMD4Q9H0A8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COMMD4Q9H0A8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
COMMD4Q9H0A8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
COMMD4Q9H0A8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COMMD4Q9H0A8 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.3■□□□□ 0.68
COMMD4Q9H0A8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
COMMD4Q9H0A8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.3■□□□□ 0.68
COMMD4Q9H0A8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
COMMD4Q9H0A8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.3■□□□□ 0.68
COMMD4Q9H0A8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COMMD4Q9H0A8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COMMD4Q9H0A8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.3■□□□□ 0.68
COMMD4Q9H0A8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COMMD4Q9H0A8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms