Protein–RNA interactions for Protein: Q9H089

LSG1, Large subunit GTPase 1 homolog, humanhuman

Known RBP Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1Q9H089 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
LSG1Q9H089 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC26.39■■□□□ 1.82
LSG1Q9H089 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
LSG1Q9H089 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
LSG1Q9H089 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC26.39■■□□□ 1.82
LSG1Q9H089 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
LSG1Q9H089 AC131281.2-201ENST00000520478 145 ntBASIC26.39■■□□□ 1.82
LSG1Q9H089 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC26.39■■□□□ 1.81
LSG1Q9H089 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
LSG1Q9H089 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC26.39■■□□□ 1.81
LSG1Q9H089 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
LSG1Q9H089 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
LSG1Q9H089 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
LSG1Q9H089 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.38■■□□□ 1.81
LSG1Q9H089 MIR3181-201ENST00000578512 73 ntBASIC26.38■■□□□ 1.81
LSG1Q9H089 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
LSG1Q9H089 AC133637.1-201ENST00000624115 1537 ntBASIC26.38■■□□□ 1.81
LSG1Q9H089 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC26.38■■□□□ 1.81
LSG1Q9H089 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
LSG1Q9H089 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC26.37■■□□□ 1.81
LSG1Q9H089 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
LSG1Q9H089 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.37■■□□□ 1.81
LSG1Q9H089 SRD5A1P1-201ENST00000442297 786 ntBASIC26.37■■□□□ 1.81
LSG1Q9H089 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.37■■□□□ 1.81
LSG1Q9H089 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
LSG1Q9H089 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
LSG1Q9H089 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
LSG1Q9H089 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
LSG1Q9H089 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
LSG1Q9H089 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
LSG1Q9H089 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC26.36■■□□□ 1.81
LSG1Q9H089 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.36■■□□□ 1.81
LSG1Q9H089 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
LSG1Q9H089 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
LSG1Q9H089 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
LSG1Q9H089 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC26.36■■□□□ 1.81
LSG1Q9H089 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
LSG1Q9H089 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC26.35■■□□□ 1.81
LSG1Q9H089 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
LSG1Q9H089 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC26.35■■□□□ 1.81
LSG1Q9H089 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC26.35■■□□□ 1.81
LSG1Q9H089 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
LSG1Q9H089 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
LSG1Q9H089 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.35■■□□□ 1.81
LSG1Q9H089 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
LSG1Q9H089 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC26.35■■□□□ 1.81
LSG1Q9H089 AC137767.1-201ENST00000602918 1920 ntBASIC26.35■■□□□ 1.81
LSG1Q9H089 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
LSG1Q9H089 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
LSG1Q9H089 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
LSG1Q9H089 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
LSG1Q9H089 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC26.34■■□□□ 1.81
LSG1Q9H089 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
LSG1Q9H089 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
LSG1Q9H089 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.34■■□□□ 1.81
LSG1Q9H089 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
LSG1Q9H089 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.34■■□□□ 1.81
LSG1Q9H089 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
LSG1Q9H089 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
LSG1Q9H089 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
LSG1Q9H089 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
LSG1Q9H089 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
LSG1Q9H089 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.33■■□□□ 1.81
LSG1Q9H089 CA15P2-201ENST00000611168 834 ntBASIC26.33■■□□□ 1.81
LSG1Q9H089 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
LSG1Q9H089 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
LSG1Q9H089 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
LSG1Q9H089 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC26.33■■□□□ 1.81
LSG1Q9H089 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
LSG1Q9H089 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
LSG1Q9H089 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
LSG1Q9H089 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
LSG1Q9H089 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC26.32■■□□□ 1.8
LSG1Q9H089 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
LSG1Q9H089 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
LSG1Q9H089 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC26.32■■□□□ 1.8
LSG1Q9H089 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.31■■□□□ 1.8
LSG1Q9H089 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC26.31■■□□□ 1.8
LSG1Q9H089 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
LSG1Q9H089 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
LSG1Q9H089 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC26.31■■□□□ 1.8
LSG1Q9H089 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.31■■□□□ 1.8
LSG1Q9H089 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC26.31■■□□□ 1.8
LSG1Q9H089 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.31■■□□□ 1.8
LSG1Q9H089 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
LSG1Q9H089 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
LSG1Q9H089 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
LSG1Q9H089 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
LSG1Q9H089 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
LSG1Q9H089 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.3■■□□□ 1.8
LSG1Q9H089 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
LSG1Q9H089 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
LSG1Q9H089 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
LSG1Q9H089 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
LSG1Q9H089 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC26.3■■□□□ 1.8
LSG1Q9H089 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC26.3■■□□□ 1.8
LSG1Q9H089 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC26.29■■□□□ 1.8
LSG1Q9H089 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
LSG1Q9H089 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
LSG1Q9H089 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms