Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-1Q9BYR8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-1Q9BYR8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-1Q9BYR8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-1Q9BYR8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-1Q9BYR8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
KRTAP3-1Q9BYR8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-1Q9BYR8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC11.15□□□□□ -0.62
KRTAP3-1Q9BYR8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-1Q9BYR8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-1Q9BYR8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-1Q9BYR8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC11.15□□□□□ -0.62
KRTAP3-1Q9BYR8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-1Q9BYR8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC11.15□□□□□ -0.62
KRTAP3-1Q9BYR8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-1Q9BYR8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-1Q9BYR8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
KRTAP3-1Q9BYR8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
KRTAP3-1Q9BYR8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-1Q9BYR8 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
KRTAP3-1Q9BYR8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-1Q9BYR8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-1Q9BYR8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-1Q9BYR8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-1Q9BYR8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-1Q9BYR8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-1Q9BYR8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-1Q9BYR8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-1Q9BYR8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-1Q9BYR8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
KRTAP3-1Q9BYR8 LINC01529-204ENST00000636474 1715 ntBASIC11.15□□□□□ -0.63
KRTAP3-1Q9BYR8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
KRTAP3-1Q9BYR8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.63
KRTAP3-1Q9BYR8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-1Q9BYR8 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-1Q9BYR8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-1Q9BYR8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
KRTAP3-1Q9BYR8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
KRTAP3-1Q9BYR8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
KRTAP3-1Q9BYR8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
KRTAP3-1Q9BYR8 AC073130.3-201ENST00000624389 2278 ntBASIC11.14□□□□□ -0.63
KRTAP3-1Q9BYR8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-1Q9BYR8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-1Q9BYR8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-1Q9BYR8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC11.14□□□□□ -0.63
KRTAP3-1Q9BYR8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC11.14□□□□□ -0.63
KRTAP3-1Q9BYR8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC11.14□□□□□ -0.63
KRTAP3-1Q9BYR8 SNX5-217ENST00000606557 1087 ntBASIC11.14□□□□□ -0.63
KRTAP3-1Q9BYR8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC11.14□□□□□ -0.63
KRTAP3-1Q9BYR8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-1Q9BYR8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-1Q9BYR8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
KRTAP3-1Q9BYR8 LINC01960-201ENST00000563759 1884 ntBASIC11.14□□□□□ -0.63
KRTAP3-1Q9BYR8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
KRTAP3-1Q9BYR8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-1Q9BYR8 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC11.14□□□□□ -0.63
KRTAP3-1Q9BYR8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
KRTAP3-1Q9BYR8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-1Q9BYR8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-1Q9BYR8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-1Q9BYR8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-1Q9BYR8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-1Q9BYR8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-1Q9BYR8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-1Q9BYR8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
KRTAP3-1Q9BYR8 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-1Q9BYR8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-1Q9BYR8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
KRTAP3-1Q9BYR8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-1Q9BYR8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-1Q9BYR8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
KRTAP3-1Q9BYR8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-1Q9BYR8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-1Q9BYR8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC11.13□□□□□ -0.63
KRTAP3-1Q9BYR8 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC11.13□□□□□ -0.63
KRTAP3-1Q9BYR8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-1Q9BYR8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC11.13□□□□□ -0.63
KRTAP3-1Q9BYR8 FP325331.1-202ENST00000623531 1380 ntBASIC11.13□□□□□ -0.63
KRTAP3-1Q9BYR8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
KRTAP3-1Q9BYR8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC11.13□□□□□ -0.63
KRTAP3-1Q9BYR8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-1Q9BYR8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
KRTAP3-1Q9BYR8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-1Q9BYR8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-1Q9BYR8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC11.12□□□□□ -0.63
KRTAP3-1Q9BYR8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-1Q9BYR8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-1Q9BYR8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-1Q9BYR8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC11.12□□□□□ -0.63
KRTAP3-1Q9BYR8 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC11.12□□□□□ -0.63
KRTAP3-1Q9BYR8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC11.12□□□□□ -0.63
KRTAP3-1Q9BYR8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-1Q9BYR8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC11.12□□□□□ -0.63
KRTAP3-1Q9BYR8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC11.12□□□□□ -0.63
KRTAP3-1Q9BYR8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC11.12□□□□□ -0.63
KRTAP3-1Q9BYR8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC11.12□□□□□ -0.63
KRTAP3-1Q9BYR8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
KRTAP3-1Q9BYR8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-1Q9BYR8 ME2-206ENST00000638410 2289 ntTSL 5 BASIC11.12□□□□□ -0.63
KRTAP3-1Q9BYR8 ME2-210ENST00000639255 2262 ntTSL 5 BASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms