Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCL13Q99616 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCL13Q99616 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCL13Q99616 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CCL13Q99616 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCL13Q99616 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.4■□□□□ 0.54
CCL13Q99616 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
CCL13Q99616 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCL13Q99616 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.39■□□□□ 0.53
CCL13Q99616 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCL13Q99616 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.39■□□□□ 0.53
CCL13Q99616 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.39■□□□□ 0.53
CCL13Q99616 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
CCL13Q99616 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.39■□□□□ 0.53
CCL13Q99616 AC010525.1-201ENST00000585559 441 ntBASIC18.39■□□□□ 0.53
CCL13Q99616 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCL13Q99616 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CCL13Q99616 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCL13Q99616 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCL13Q99616 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.38■□□□□ 0.53
CCL13Q99616 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCL13Q99616 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.38■□□□□ 0.53
CCL13Q99616 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCL13Q99616 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCL13Q99616 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCL13Q99616 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCL13Q99616 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCL13Q99616 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCL13Q99616 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCL13Q99616 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.37■□□□□ 0.53
CCL13Q99616 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CCL13Q99616 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCL13Q99616 EDA-201ENST00000338901 1233 ntBASIC18.37■□□□□ 0.53
CCL13Q99616 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.37■□□□□ 0.53
CCL13Q99616 SLC47A1P1-202ENST00000449666 945 ntBASIC18.37■□□□□ 0.53
CCL13Q99616 OR2I1P-207ENST00000453522 948 ntBASIC18.37■□□□□ 0.53
CCL13Q99616 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.37■□□□□ 0.53
CCL13Q99616 AC008764.7-201ENST00000593779 1081 ntBASIC18.37■□□□□ 0.53
CCL13Q99616 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CCL13Q99616 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCL13Q99616 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.37■□□□□ 0.53
CCL13Q99616 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCL13Q99616 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCL13Q99616 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCL13Q99616 C1orf229-201ENST00000623686 2258 ntBASIC18.37■□□□□ 0.53
CCL13Q99616 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCL13Q99616 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCL13Q99616 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCL13Q99616 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCL13Q99616 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCL13Q99616 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.36■□□□□ 0.53
CCL13Q99616 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.36■□□□□ 0.53
CCL13Q99616 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.36■□□□□ 0.53
CCL13Q99616 AL355001.2-201ENST00000620617 1191 ntBASIC18.36■□□□□ 0.53
CCL13Q99616 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.36■□□□□ 0.53
CCL13Q99616 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CCL13Q99616 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCL13Q99616 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCL13Q99616 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL13Q99616 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.35■□□□□ 0.53
CCL13Q99616 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL13Q99616 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCL13Q99616 MIR638-201ENST00000385237 100 ntBASIC18.35■□□□□ 0.53
CCL13Q99616 AC133561.4-201ENST00000566112 224 ntBASIC18.35■□□□□ 0.53
CCL13Q99616 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.35■□□□□ 0.53
CCL13Q99616 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.35■□□□□ 0.53
CCL13Q99616 AC005837.3-201ENST00000612163 286 ntBASIC18.35■□□□□ 0.53
CCL13Q99616 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL13Q99616 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL13Q99616 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCL13Q99616 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL13Q99616 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL13Q99616 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.34■□□□□ 0.53
CCL13Q99616 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CCL13Q99616 AC068473.5-201ENST00000616428 2072 ntBASIC18.34■□□□□ 0.53
CCL13Q99616 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL13Q99616 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.34■□□□□ 0.53
CCL13Q99616 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCL13Q99616 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCL13Q99616 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL13Q99616 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCL13Q99616 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCL13Q99616 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.34■□□□□ 0.53
CCL13Q99616 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCL13Q99616 BX842568.3-201ENST00000418104 571 ntBASIC18.34■□□□□ 0.53
CCL13Q99616 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCL13Q99616 AC233992.3-201ENST00000607491 485 ntBASIC18.34■□□□□ 0.53
CCL13Q99616 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.34■□□□□ 0.53
CCL13Q99616 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCL13Q99616 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCL13Q99616 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCL13Q99616 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCL13Q99616 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCL13Q99616 LINC01960-201ENST00000563759 1884 ntBASIC18.33■□□□□ 0.53
CCL13Q99616 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCL13Q99616 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCL13Q99616 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CCL13Q99616 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.33■□□□□ 0.52
CCL13Q99616 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCL13Q99616 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms