Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.67■□□□□ 0.58
CITED4Q96RK1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CITED4Q96RK1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CITED4Q96RK1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CITED4Q96RK1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.67■□□□□ 0.58
CITED4Q96RK1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CITED4Q96RK1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CITED4Q96RK1 LINC01521-201ENST00000504184 1943 ntBASIC18.66■□□□□ 0.58
CITED4Q96RK1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CITED4Q96RK1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CITED4Q96RK1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CITED4Q96RK1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CITED4Q96RK1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CITED4Q96RK1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CITED4Q96RK1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CITED4Q96RK1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CITED4Q96RK1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CITED4Q96RK1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.66■□□□□ 0.58
CITED4Q96RK1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CITED4Q96RK1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CITED4Q96RK1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CITED4Q96RK1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CITED4Q96RK1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CITED4Q96RK1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CITED4Q96RK1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CITED4Q96RK1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CITED4Q96RK1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CITED4Q96RK1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CITED4Q96RK1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CITED4Q96RK1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.65■□□□□ 0.58
CITED4Q96RK1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CITED4Q96RK1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.65■□□□□ 0.58
CITED4Q96RK1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CITED4Q96RK1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CITED4Q96RK1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CITED4Q96RK1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CITED4Q96RK1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
CITED4Q96RK1 AC087289.5-201ENST00000586076 3175 ntBASIC18.65■□□□□ 0.58
CITED4Q96RK1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CITED4Q96RK1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CITED4Q96RK1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.64■□□□□ 0.58
CITED4Q96RK1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CITED4Q96RK1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CITED4Q96RK1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CITED4Q96RK1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.64■□□□□ 0.57
CITED4Q96RK1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CITED4Q96RK1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CITED4Q96RK1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CITED4Q96RK1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CITED4Q96RK1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CITED4Q96RK1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CITED4Q96RK1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CITED4Q96RK1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CITED4Q96RK1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CITED4Q96RK1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CITED4Q96RK1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CITED4Q96RK1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CITED4Q96RK1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CITED4Q96RK1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CITED4Q96RK1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CITED4Q96RK1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.63■□□□□ 0.57
CITED4Q96RK1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CITED4Q96RK1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CITED4Q96RK1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CITED4Q96RK1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CITED4Q96RK1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CITED4Q96RK1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CITED4Q96RK1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CITED4Q96RK1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CITED4Q96RK1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
CITED4Q96RK1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CITED4Q96RK1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CITED4Q96RK1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.61■□□□□ 0.57
CITED4Q96RK1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.61■□□□□ 0.57
CITED4Q96RK1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.61■□□□□ 0.57
CITED4Q96RK1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CITED4Q96RK1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CITED4Q96RK1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CITED4Q96RK1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CITED4Q96RK1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CITED4Q96RK1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CITED4Q96RK1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.61■□□□□ 0.57
CITED4Q96RK1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.61■□□□□ 0.57
CITED4Q96RK1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CITED4Q96RK1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CITED4Q96RK1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.6■□□□□ 0.57
CITED4Q96RK1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CITED4Q96RK1 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CITED4Q96RK1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
CITED4Q96RK1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CITED4Q96RK1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CITED4Q96RK1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CITED4Q96RK1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CITED4Q96RK1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CITED4Q96RK1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CITED4Q96RK1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CITED4Q96RK1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CITED4Q96RK1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CITED4Q96RK1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CITED4Q96RK1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms