Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 AC133637.1-201ENST00000624115 1537 ntBASIC20.52■□□□□ 0.87
MS4A4EQ96PG1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
MS4A4EQ96PG1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MS4A4EQ96PG1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MS4A4EQ96PG1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MS4A4EQ96PG1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.51■□□□□ 0.87
MS4A4EQ96PG1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
MS4A4EQ96PG1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.51■□□□□ 0.87
MS4A4EQ96PG1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.51■□□□□ 0.87
MS4A4EQ96PG1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MS4A4EQ96PG1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MS4A4EQ96PG1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MS4A4EQ96PG1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MS4A4EQ96PG1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
MS4A4EQ96PG1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
MS4A4EQ96PG1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
MS4A4EQ96PG1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MS4A4EQ96PG1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MS4A4EQ96PG1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.5■□□□□ 0.87
MS4A4EQ96PG1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.5■□□□□ 0.87
MS4A4EQ96PG1 AC131281.2-201ENST00000520478 145 ntBASIC20.5■□□□□ 0.87
MS4A4EQ96PG1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.5■□□□□ 0.87
MS4A4EQ96PG1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MS4A4EQ96PG1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
MS4A4EQ96PG1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.5■□□□□ 0.87
MS4A4EQ96PG1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MS4A4EQ96PG1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MS4A4EQ96PG1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
MS4A4EQ96PG1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A4EQ96PG1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.49■□□□□ 0.87
MS4A4EQ96PG1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
MS4A4EQ96PG1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.49■□□□□ 0.87
MS4A4EQ96PG1 MIR4466-201ENST00000606121 54 ntBASIC20.49■□□□□ 0.87
MS4A4EQ96PG1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.49■□□□□ 0.87
MS4A4EQ96PG1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A4EQ96PG1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A4EQ96PG1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A4EQ96PG1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A4EQ96PG1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.49■□□□□ 0.87
MS4A4EQ96PG1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A4EQ96PG1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A4EQ96PG1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
MS4A4EQ96PG1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A4EQ96PG1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A4EQ96PG1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.48■□□□□ 0.87
MS4A4EQ96PG1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
MS4A4EQ96PG1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
MS4A4EQ96PG1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.48■□□□□ 0.87
MS4A4EQ96PG1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A4EQ96PG1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
MS4A4EQ96PG1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A4EQ96PG1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A4EQ96PG1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MS4A4EQ96PG1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
MS4A4EQ96PG1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
MS4A4EQ96PG1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MS4A4EQ96PG1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
MS4A4EQ96PG1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
MS4A4EQ96PG1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MS4A4EQ96PG1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.47■□□□□ 0.87
MS4A4EQ96PG1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MS4A4EQ96PG1 MIR3181-201ENST00000578512 73 ntBASIC20.47■□□□□ 0.87
MS4A4EQ96PG1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.47■□□□□ 0.87
MS4A4EQ96PG1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
MS4A4EQ96PG1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MS4A4EQ96PG1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MS4A4EQ96PG1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MS4A4EQ96PG1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.47■□□□□ 0.87
MS4A4EQ96PG1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
MS4A4EQ96PG1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MS4A4EQ96PG1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MS4A4EQ96PG1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
MS4A4EQ96PG1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MS4A4EQ96PG1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
MS4A4EQ96PG1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MS4A4EQ96PG1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MS4A4EQ96PG1 LINC00526-201ENST00000581067 1875 ntBASIC20.46■□□□□ 0.87
MS4A4EQ96PG1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MS4A4EQ96PG1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MS4A4EQ96PG1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.46■□□□□ 0.87
MS4A4EQ96PG1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
MS4A4EQ96PG1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MS4A4EQ96PG1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MS4A4EQ96PG1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MS4A4EQ96PG1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
MS4A4EQ96PG1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
MS4A4EQ96PG1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
MS4A4EQ96PG1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MS4A4EQ96PG1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.45■□□□□ 0.86
MS4A4EQ96PG1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MS4A4EQ96PG1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MS4A4EQ96PG1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.45■□□□□ 0.86
MS4A4EQ96PG1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
MS4A4EQ96PG1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
MS4A4EQ96PG1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.45■□□□□ 0.86
MS4A4EQ96PG1 EP400NL-214ENST00000641289 2402 ntBASIC20.44■□□□□ 0.86
MS4A4EQ96PG1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
MS4A4EQ96PG1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
MS4A4EQ96PG1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
MS4A4EQ96PG1 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms