Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC47A1Q96FL8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC47A1Q96FL8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC47A1Q96FL8 AL031848.2-201ENST00000607670 837 ntBASIC20.67■□□□□ 0.9
SLC47A1Q96FL8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC47A1Q96FL8 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC47A1Q96FL8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SLC47A1Q96FL8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC47A1Q96FL8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC47A1Q96FL8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC47A1Q96FL8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC47A1Q96FL8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
SLC47A1Q96FL8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC47A1Q96FL8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC47A1Q96FL8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC47A1Q96FL8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC47A1Q96FL8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC47A1Q96FL8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SLC47A1Q96FL8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC47A1Q96FL8 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC47A1Q96FL8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC47A1Q96FL8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC47A1Q96FL8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SLC47A1Q96FL8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC47A1Q96FL8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC47A1Q96FL8 AC137630.3-201ENST00000607245 391 ntBASIC20.65■□□□□ 0.9
SLC47A1Q96FL8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC47A1Q96FL8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC47A1Q96FL8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC47A1Q96FL8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC47A1Q96FL8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.65■□□□□ 0.9
SLC47A1Q96FL8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC47A1Q96FL8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC47A1Q96FL8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC47A1Q96FL8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.64■□□□□ 0.9
SLC47A1Q96FL8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC47A1Q96FL8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC47A1Q96FL8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC47A1Q96FL8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC47A1Q96FL8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SLC47A1Q96FL8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC47A1Q96FL8 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
SLC47A1Q96FL8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SLC47A1Q96FL8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.64■□□□□ 0.89
SLC47A1Q96FL8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.64■□□□□ 0.89
SLC47A1Q96FL8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLC47A1Q96FL8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC47A1Q96FL8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLC47A1Q96FL8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.89
SLC47A1Q96FL8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.63■□□□□ 0.89
SLC47A1Q96FL8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC47A1Q96FL8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC47A1Q96FL8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC47A1Q96FL8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SLC47A1Q96FL8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC47A1Q96FL8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC47A1Q96FL8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC47A1Q96FL8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SLC47A1Q96FL8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC47A1Q96FL8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC47A1Q96FL8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.63■□□□□ 0.89
SLC47A1Q96FL8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC47A1Q96FL8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
SLC47A1Q96FL8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.63■□□□□ 0.89
SLC47A1Q96FL8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC47A1Q96FL8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLC47A1Q96FL8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.63■□□□□ 0.89
SLC47A1Q96FL8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLC47A1Q96FL8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC47A1Q96FL8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC47A1Q96FL8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC47A1Q96FL8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SLC47A1Q96FL8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SLC47A1Q96FL8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLC47A1Q96FL8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.62■□□□□ 0.89
SLC47A1Q96FL8 AC144652.1-201ENST00000609974 1624 ntBASIC20.62■□□□□ 0.89
SLC47A1Q96FL8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLC47A1Q96FL8 AC026310.3-201ENST00000625186 2373 ntBASIC20.61■□□□□ 0.89
SLC47A1Q96FL8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC47A1Q96FL8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC47A1Q96FL8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SLC47A1Q96FL8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC47A1Q96FL8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC47A1Q96FL8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.61■□□□□ 0.89
SLC47A1Q96FL8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.61■□□□□ 0.89
SLC47A1Q96FL8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLC47A1Q96FL8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.61■□□□□ 0.89
SLC47A1Q96FL8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC47A1Q96FL8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC47A1Q96FL8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC47A1Q96FL8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.61■□□□□ 0.89
SLC47A1Q96FL8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLC47A1Q96FL8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC47A1Q96FL8 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.6■□□□□ 0.89
SLC47A1Q96FL8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SLC47A1Q96FL8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.6■□□□□ 0.89
SLC47A1Q96FL8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC47A1Q96FL8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC47A1Q96FL8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
SLC47A1Q96FL8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms