Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PTCD2Q8WV60 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTCD2Q8WV60 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTCD2Q8WV60 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTCD2Q8WV60 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTCD2Q8WV60 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PTCD2Q8WV60 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTCD2Q8WV60 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
PTCD2Q8WV60 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PTCD2Q8WV60 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PTCD2Q8WV60 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.23■■□□□ 1.15
PTCD2Q8WV60 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.23■■□□□ 1.15
PTCD2Q8WV60 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PTCD2Q8WV60 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
PTCD2Q8WV60 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.23■■□□□ 1.15
PTCD2Q8WV60 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PTCD2Q8WV60 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.23■■□□□ 1.15
PTCD2Q8WV60 AC135279.3-201ENST00000610945 1311 ntBASIC22.23■■□□□ 1.15
PTCD2Q8WV60 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PTCD2Q8WV60 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.23■■□□□ 1.15
PTCD2Q8WV60 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
PTCD2Q8WV60 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PTCD2Q8WV60 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.22■■□□□ 1.15
PTCD2Q8WV60 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
PTCD2Q8WV60 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PTCD2Q8WV60 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.22■■□□□ 1.15
PTCD2Q8WV60 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
PTCD2Q8WV60 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PTCD2Q8WV60 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
PTCD2Q8WV60 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PTCD2Q8WV60 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PTCD2Q8WV60 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
PTCD2Q8WV60 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PTCD2Q8WV60 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.21■■□□□ 1.15
PTCD2Q8WV60 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
PTCD2Q8WV60 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PTCD2Q8WV60 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
PTCD2Q8WV60 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.21■■□□□ 1.15
PTCD2Q8WV60 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
PTCD2Q8WV60 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.21■■□□□ 1.15
PTCD2Q8WV60 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.21■■□□□ 1.15
PTCD2Q8WV60 LINC00526-201ENST00000581067 1875 ntBASIC22.21■■□□□ 1.15
PTCD2Q8WV60 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PTCD2Q8WV60 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PTCD2Q8WV60 AC087742.1-201ENST00000575880 1738 ntBASIC22.2■■□□□ 1.14
PTCD2Q8WV60 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PTCD2Q8WV60 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.2■■□□□ 1.14
PTCD2Q8WV60 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.2■■□□□ 1.14
PTCD2Q8WV60 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.2■■□□□ 1.14
PTCD2Q8WV60 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.2■■□□□ 1.14
PTCD2Q8WV60 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PTCD2Q8WV60 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PTCD2Q8WV60 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PTCD2Q8WV60 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PTCD2Q8WV60 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.2■■□□□ 1.14
PTCD2Q8WV60 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
PTCD2Q8WV60 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
PTCD2Q8WV60 SYT6-210ENST00000641643 1587 ntBASIC22.2■■□□□ 1.14
PTCD2Q8WV60 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
PTCD2Q8WV60 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
PTCD2Q8WV60 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PTCD2Q8WV60 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PTCD2Q8WV60 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PTCD2Q8WV60 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PTCD2Q8WV60 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.19■■□□□ 1.14
PTCD2Q8WV60 AC133561.4-201ENST00000566112 224 ntBASIC22.19■■□□□ 1.14
PTCD2Q8WV60 AC241377.3-202ENST00000626088 1088 ntBASIC22.19■■□□□ 1.14
PTCD2Q8WV60 AC241585.3-202ENST00000628937 1088 ntBASIC22.19■■□□□ 1.14
PTCD2Q8WV60 AC245100.8-202ENST00000629247 1058 ntBASIC22.19■■□□□ 1.14
PTCD2Q8WV60 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PTCD2Q8WV60 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PTCD2Q8WV60 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PTCD2Q8WV60 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
PTCD2Q8WV60 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PTCD2Q8WV60 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PTCD2Q8WV60 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PTCD2Q8WV60 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PTCD2Q8WV60 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.18■■□□□ 1.14
PTCD2Q8WV60 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PTCD2Q8WV60 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PTCD2Q8WV60 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.18■■□□□ 1.14
PTCD2Q8WV60 AL499627.2-201ENST00000606283 725 ntBASIC22.18■■□□□ 1.14
PTCD2Q8WV60 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.18■■□□□ 1.14
PTCD2Q8WV60 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
PTCD2Q8WV60 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.17■■□□□ 1.14
PTCD2Q8WV60 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PTCD2Q8WV60 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PTCD2Q8WV60 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.17■■□□□ 1.14
PTCD2Q8WV60 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.17■■□□□ 1.14
PTCD2Q8WV60 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.17■■□□□ 1.14
PTCD2Q8WV60 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PTCD2Q8WV60 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PTCD2Q8WV60 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PTCD2Q8WV60 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PTCD2Q8WV60 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PTCD2Q8WV60 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PTCD2Q8WV60 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.16■■□□□ 1.14
PTCD2Q8WV60 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PTCD2Q8WV60 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PTCD2Q8WV60 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms