Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPS4Y2Q8TD47 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
RPS4Y2Q8TD47 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
RPS4Y2Q8TD47 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
RPS4Y2Q8TD47 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.27■□□□□ 0.67
RPS4Y2Q8TD47 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.26■□□□□ 0.67
RPS4Y2Q8TD47 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPS4Y2Q8TD47 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.26■□□□□ 0.67
RPS4Y2Q8TD47 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.26■□□□□ 0.67
RPS4Y2Q8TD47 DUX4L4-201ENST00000566884 1269 ntBASIC19.26■□□□□ 0.67
RPS4Y2Q8TD47 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
RPS4Y2Q8TD47 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPS4Y2Q8TD47 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
RPS4Y2Q8TD47 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPS4Y2Q8TD47 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.25■□□□□ 0.67
RPS4Y2Q8TD47 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.25■□□□□ 0.67
RPS4Y2Q8TD47 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
RPS4Y2Q8TD47 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS4Y2Q8TD47 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.25■□□□□ 0.67
RPS4Y2Q8TD47 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.25■□□□□ 0.67
RPS4Y2Q8TD47 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.25■□□□□ 0.67
RPS4Y2Q8TD47 CA15P2-201ENST00000611168 834 ntBASIC19.25■□□□□ 0.67
RPS4Y2Q8TD47 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS4Y2Q8TD47 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPS4Y2Q8TD47 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS4Y2Q8TD47 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS4Y2Q8TD47 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.25■□□□□ 0.67
RPS4Y2Q8TD47 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.25■□□□□ 0.67
RPS4Y2Q8TD47 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RPS4Y2Q8TD47 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS4Y2Q8TD47 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPS4Y2Q8TD47 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.24■□□□□ 0.67
RPS4Y2Q8TD47 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS4Y2Q8TD47 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS4Y2Q8TD47 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.24■□□□□ 0.67
RPS4Y2Q8TD47 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS4Y2Q8TD47 AC009086.3-201ENST00000623486 1008 ntBASIC19.24■□□□□ 0.67
RPS4Y2Q8TD47 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS4Y2Q8TD47 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS4Y2Q8TD47 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS4Y2Q8TD47 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS4Y2Q8TD47 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS4Y2Q8TD47 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS4Y2Q8TD47 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS4Y2Q8TD47 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPS4Y2Q8TD47 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RPS4Y2Q8TD47 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.23■□□□□ 0.67
RPS4Y2Q8TD47 YBX1P4-201ENST00000392794 808 ntBASIC19.23■□□□□ 0.67
RPS4Y2Q8TD47 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.23■□□□□ 0.67
RPS4Y2Q8TD47 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPS4Y2Q8TD47 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPS4Y2Q8TD47 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPS4Y2Q8TD47 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPS4Y2Q8TD47 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.23■□□□□ 0.67
RPS4Y2Q8TD47 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RPS4Y2Q8TD47 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.22■□□□□ 0.67
RPS4Y2Q8TD47 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPS4Y2Q8TD47 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPS4Y2Q8TD47 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RPS4Y2Q8TD47 AC137630.3-201ENST00000607245 391 ntBASIC19.22■□□□□ 0.67
RPS4Y2Q8TD47 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPS4Y2Q8TD47 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.22■□□□□ 0.67
RPS4Y2Q8TD47 MIR6722-201ENST00000617286 78 ntBASIC19.22■□□□□ 0.67
RPS4Y2Q8TD47 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.22■□□□□ 0.67
RPS4Y2Q8TD47 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPS4Y2Q8TD47 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RPS4Y2Q8TD47 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.22■□□□□ 0.67
RPS4Y2Q8TD47 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPS4Y2Q8TD47 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPS4Y2Q8TD47 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPS4Y2Q8TD47 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RPS4Y2Q8TD47 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPS4Y2Q8TD47 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPS4Y2Q8TD47 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPS4Y2Q8TD47 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPS4Y2Q8TD47 RARRES2P1-201ENST00000474487 481 ntBASIC19.21■□□□□ 0.67
RPS4Y2Q8TD47 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.21■□□□□ 0.67
RPS4Y2Q8TD47 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RPS4Y2Q8TD47 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPS4Y2Q8TD47 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPS4Y2Q8TD47 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPS4Y2Q8TD47 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPS4Y2Q8TD47 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPS4Y2Q8TD47 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.2■□□□□ 0.66
RPS4Y2Q8TD47 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPS4Y2Q8TD47 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.2■□□□□ 0.66
RPS4Y2Q8TD47 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPS4Y2Q8TD47 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.2■□□□□ 0.66
RPS4Y2Q8TD47 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
RPS4Y2Q8TD47 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPS4Y2Q8TD47 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPS4Y2Q8TD47 AC005703.6-201ENST00000623265 1329 ntBASIC19.2■□□□□ 0.66
RPS4Y2Q8TD47 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RPS4Y2Q8TD47 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPS4Y2Q8TD47 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.2■□□□□ 0.66
RPS4Y2Q8TD47 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPS4Y2Q8TD47 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPS4Y2Q8TD47 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.19■□□□□ 0.66
RPS4Y2Q8TD47 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPS4Y2Q8TD47 KRT8P33-201ENST00000508125 1423 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms