Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RAB3IL1Q8TBN0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RAB3IL1Q8TBN0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RAB3IL1Q8TBN0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RAB3IL1Q8TBN0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RAB3IL1Q8TBN0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RAB3IL1Q8TBN0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.84■■□□□ 1.09
RAB3IL1Q8TBN0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
RAB3IL1Q8TBN0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RAB3IL1Q8TBN0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAB3IL1Q8TBN0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
RAB3IL1Q8TBN0 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAB3IL1Q8TBN0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAB3IL1Q8TBN0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.84■■□□□ 1.09
RAB3IL1Q8TBN0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAB3IL1Q8TBN0 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAB3IL1Q8TBN0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAB3IL1Q8TBN0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
RAB3IL1Q8TBN0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAB3IL1Q8TBN0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RAB3IL1Q8TBN0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAB3IL1Q8TBN0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RAB3IL1Q8TBN0 AF131216.4-201ENST00000638924 1588 ntBASIC21.83■■□□□ 1.09
RAB3IL1Q8TBN0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAB3IL1Q8TBN0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.09
RAB3IL1Q8TBN0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.83■■□□□ 1.09
RAB3IL1Q8TBN0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.83■■□□□ 1.08
RAB3IL1Q8TBN0 AC144652.1-201ENST00000609974 1624 ntBASIC21.83■■□□□ 1.08
RAB3IL1Q8TBN0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
RAB3IL1Q8TBN0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.82■■□□□ 1.08
RAB3IL1Q8TBN0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.82■■□□□ 1.08
RAB3IL1Q8TBN0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
RAB3IL1Q8TBN0 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.82■■□□□ 1.08
RAB3IL1Q8TBN0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.82■■□□□ 1.08
RAB3IL1Q8TBN0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAB3IL1Q8TBN0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
RAB3IL1Q8TBN0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAB3IL1Q8TBN0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.81■■□□□ 1.08
RAB3IL1Q8TBN0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.81■■□□□ 1.08
RAB3IL1Q8TBN0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAB3IL1Q8TBN0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RAB3IL1Q8TBN0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RAB3IL1Q8TBN0 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAB3IL1Q8TBN0 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
RAB3IL1Q8TBN0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAB3IL1Q8TBN0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RAB3IL1Q8TBN0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RAB3IL1Q8TBN0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAB3IL1Q8TBN0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RAB3IL1Q8TBN0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RAB3IL1Q8TBN0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
RAB3IL1Q8TBN0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAB3IL1Q8TBN0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.8■■□□□ 1.08
RAB3IL1Q8TBN0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
RAB3IL1Q8TBN0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAB3IL1Q8TBN0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAB3IL1Q8TBN0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAB3IL1Q8TBN0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.8■■□□□ 1.08
RAB3IL1Q8TBN0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.8■■□□□ 1.08
RAB3IL1Q8TBN0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAB3IL1Q8TBN0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAB3IL1Q8TBN0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAB3IL1Q8TBN0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAB3IL1Q8TBN0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAB3IL1Q8TBN0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAB3IL1Q8TBN0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAB3IL1Q8TBN0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAB3IL1Q8TBN0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.79■■□□□ 1.08
RAB3IL1Q8TBN0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
RAB3IL1Q8TBN0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAB3IL1Q8TBN0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.79■■□□□ 1.08
RAB3IL1Q8TBN0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.79■■□□□ 1.08
RAB3IL1Q8TBN0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RAB3IL1Q8TBN0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.79■■□□□ 1.08
RAB3IL1Q8TBN0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.79■■□□□ 1.08
RAB3IL1Q8TBN0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAB3IL1Q8TBN0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAB3IL1Q8TBN0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.79■■□□□ 1.08
RAB3IL1Q8TBN0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAB3IL1Q8TBN0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RAB3IL1Q8TBN0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RAB3IL1Q8TBN0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAB3IL1Q8TBN0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAB3IL1Q8TBN0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RAB3IL1Q8TBN0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
RAB3IL1Q8TBN0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.78■■□□□ 1.08
RAB3IL1Q8TBN0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.78■■□□□ 1.08
RAB3IL1Q8TBN0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RAB3IL1Q8TBN0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RAB3IL1Q8TBN0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RAB3IL1Q8TBN0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAB3IL1Q8TBN0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAB3IL1Q8TBN0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAB3IL1Q8TBN0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RAB3IL1Q8TBN0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.78■■□□□ 1.08
RAB3IL1Q8TBN0 NTF6A-201ENST00000591175 560 ntBASIC21.78■■□□□ 1.08
RAB3IL1Q8TBN0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RAB3IL1Q8TBN0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAB3IL1Q8TBN0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAB3IL1Q8TBN0 AC026310.3-201ENST00000625186 2373 ntBASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms