Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.62■■□□□ 1.05
HMGCLL1Q8TB92 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
HMGCLL1Q8TB92 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HMGCLL1Q8TB92 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HMGCLL1Q8TB92 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMGCLL1Q8TB92 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.61■■□□□ 1.05
HMGCLL1Q8TB92 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HMGCLL1Q8TB92 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMGCLL1Q8TB92 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMGCLL1Q8TB92 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMGCLL1Q8TB92 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.61■■□□□ 1.05
HMGCLL1Q8TB92 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMGCLL1Q8TB92 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMGCLL1Q8TB92 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
HMGCLL1Q8TB92 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMGCLL1Q8TB92 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.61■■□□□ 1.05
HMGCLL1Q8TB92 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.61■■□□□ 1.05
HMGCLL1Q8TB92 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
HMGCLL1Q8TB92 AC242852.2-201ENST00000615738 1807 ntBASIC21.61■■□□□ 1.05
HMGCLL1Q8TB92 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.6■■□□□ 1.05
HMGCLL1Q8TB92 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
HMGCLL1Q8TB92 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
HMGCLL1Q8TB92 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HMGCLL1Q8TB92 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HMGCLL1Q8TB92 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HMGCLL1Q8TB92 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
HMGCLL1Q8TB92 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HMGCLL1Q8TB92 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HMGCLL1Q8TB92 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.6■■□□□ 1.05
HMGCLL1Q8TB92 AC009086.3-201ENST00000623486 1008 ntBASIC21.6■■□□□ 1.05
HMGCLL1Q8TB92 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.6■■□□□ 1.05
HMGCLL1Q8TB92 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.6■■□□□ 1.05
HMGCLL1Q8TB92 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.6■■□□□ 1.05
HMGCLL1Q8TB92 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HMGCLL1Q8TB92 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HMGCLL1Q8TB92 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HMGCLL1Q8TB92 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HMGCLL1Q8TB92 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
HMGCLL1Q8TB92 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.59■■□□□ 1.05
HMGCLL1Q8TB92 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HMGCLL1Q8TB92 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HMGCLL1Q8TB92 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HMGCLL1Q8TB92 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
HMGCLL1Q8TB92 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.59■■□□□ 1.05
HMGCLL1Q8TB92 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.59■■□□□ 1.05
HMGCLL1Q8TB92 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HMGCLL1Q8TB92 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
HMGCLL1Q8TB92 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.59■■□□□ 1.05
HMGCLL1Q8TB92 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.59■■□□□ 1.05
HMGCLL1Q8TB92 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.59■■□□□ 1.05
HMGCLL1Q8TB92 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.59■■□□□ 1.05
HMGCLL1Q8TB92 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HMGCLL1Q8TB92 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.59■■□□□ 1.05
HMGCLL1Q8TB92 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
HMGCLL1Q8TB92 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HMGCLL1Q8TB92 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HMGCLL1Q8TB92 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.59■■□□□ 1.05
HMGCLL1Q8TB92 AL353803.4-201ENST00000565882 1934 ntBASIC21.59■■□□□ 1.05
HMGCLL1Q8TB92 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HMGCLL1Q8TB92 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HMGCLL1Q8TB92 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
HMGCLL1Q8TB92 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
HMGCLL1Q8TB92 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.58■■□□□ 1.05
HMGCLL1Q8TB92 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
HMGCLL1Q8TB92 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HMGCLL1Q8TB92 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
HMGCLL1Q8TB92 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.58■■□□□ 1.05
HMGCLL1Q8TB92 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.58■■□□□ 1.05
HMGCLL1Q8TB92 AL499627.2-201ENST00000606283 725 ntBASIC21.58■■□□□ 1.05
HMGCLL1Q8TB92 AL138724.1-201ENST00000606771 1088 ntBASIC21.58■■□□□ 1.05
HMGCLL1Q8TB92 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
HMGCLL1Q8TB92 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
HMGCLL1Q8TB92 ESRRAP2-201ENST00000418437 1549 ntBASIC21.58■■□□□ 1.04
HMGCLL1Q8TB92 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
HMGCLL1Q8TB92 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
HMGCLL1Q8TB92 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.58■■□□□ 1.04
HMGCLL1Q8TB92 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HMGCLL1Q8TB92 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMGCLL1Q8TB92 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.57■■□□□ 1.04
HMGCLL1Q8TB92 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMGCLL1Q8TB92 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HMGCLL1Q8TB92 AC006455.2-201ENST00000429931 906 ntBASIC21.57■■□□□ 1.04
HMGCLL1Q8TB92 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.57■■□□□ 1.04
HMGCLL1Q8TB92 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
HMGCLL1Q8TB92 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.57■■□□□ 1.04
HMGCLL1Q8TB92 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HMGCLL1Q8TB92 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
HMGCLL1Q8TB92 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.56■■□□□ 1.04
HMGCLL1Q8TB92 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.56■■□□□ 1.04
HMGCLL1Q8TB92 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMGCLL1Q8TB92 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMGCLL1Q8TB92 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.56■■□□□ 1.04
HMGCLL1Q8TB92 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.56■■□□□ 1.04
HMGCLL1Q8TB92 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.56■■□□□ 1.04
HMGCLL1Q8TB92 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMGCLL1Q8TB92 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMGCLL1Q8TB92 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMGCLL1Q8TB92 AC139530.1-201ENST00000575312 1977 ntBASIC21.56■■□□□ 1.04
HMGCLL1Q8TB92 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.55■■□□□ 1.04
HMGCLL1Q8TB92 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms