Protein–RNA interactions for Protein: Q8NFY4

SEMA6D, Semaphorin-6D, humanhuman

Predictions only

Length 1,073 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6DQ8NFY4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA6DQ8NFY4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA6DQ8NFY4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.13■□□□□ 0.65
SEMA6DQ8NFY4 DUX4L4-201ENST00000566884 1269 ntBASIC19.13■□□□□ 0.65
SEMA6DQ8NFY4 MIR6724-1-201ENST00000616420 92 ntBASIC19.13■□□□□ 0.65
SEMA6DQ8NFY4 MIR6724-2-201ENST00000616483 92 ntBASIC19.13■□□□□ 0.65
SEMA6DQ8NFY4 MIR6724-4-201ENST00000617390 92 ntBASIC19.13■□□□□ 0.65
SEMA6DQ8NFY4 MIR6724-3-201ENST00000622482 92 ntBASIC19.13■□□□□ 0.65
SEMA6DQ8NFY4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SEMA6DQ8NFY4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA6DQ8NFY4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SEMA6DQ8NFY4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA6DQ8NFY4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SEMA6DQ8NFY4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA6DQ8NFY4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA6DQ8NFY4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SEMA6DQ8NFY4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SEMA6DQ8NFY4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.13■□□□□ 0.65
SEMA6DQ8NFY4 EP400NL-214ENST00000641289 2402 ntBASIC19.13■□□□□ 0.65
SEMA6DQ8NFY4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SEMA6DQ8NFY4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA6DQ8NFY4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA6DQ8NFY4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA6DQ8NFY4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SEMA6DQ8NFY4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
SEMA6DQ8NFY4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.12■□□□□ 0.65
SEMA6DQ8NFY4 ECEL1P1-201ENST00000373592 1742 ntBASIC19.12■□□□□ 0.65
SEMA6DQ8NFY4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.12■□□□□ 0.65
SEMA6DQ8NFY4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA6DQ8NFY4 AC009086.3-201ENST00000623486 1008 ntBASIC19.12■□□□□ 0.65
SEMA6DQ8NFY4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA6DQ8NFY4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA6DQ8NFY4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA6DQ8NFY4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.12■□□□□ 0.65
SEMA6DQ8NFY4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA6DQ8NFY4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SEMA6DQ8NFY4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SEMA6DQ8NFY4 AC127496.7-201ENST00000625110 1798 ntBASIC19.11■□□□□ 0.65
SEMA6DQ8NFY4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SEMA6DQ8NFY4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SEMA6DQ8NFY4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.11■□□□□ 0.65
SEMA6DQ8NFY4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.11■□□□□ 0.65
SEMA6DQ8NFY4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.11■□□□□ 0.65
SEMA6DQ8NFY4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.11■□□□□ 0.65
SEMA6DQ8NFY4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SEMA6DQ8NFY4 AC005837.3-201ENST00000612163 286 ntBASIC19.11■□□□□ 0.65
SEMA6DQ8NFY4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.11■□□□□ 0.65
SEMA6DQ8NFY4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SEMA6DQ8NFY4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SEMA6DQ8NFY4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SEMA6DQ8NFY4 AC242852.2-201ENST00000615738 1807 ntBASIC19.11■□□□□ 0.65
SEMA6DQ8NFY4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SEMA6DQ8NFY4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SEMA6DQ8NFY4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SEMA6DQ8NFY4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SEMA6DQ8NFY4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SEMA6DQ8NFY4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SEMA6DQ8NFY4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.1■□□□□ 0.65
SEMA6DQ8NFY4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SEMA6DQ8NFY4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SEMA6DQ8NFY4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SEMA6DQ8NFY4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SEMA6DQ8NFY4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SEMA6DQ8NFY4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SEMA6DQ8NFY4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SEMA6DQ8NFY4 LINC00526-201ENST00000581067 1875 ntBASIC19.09■□□□□ 0.65
SEMA6DQ8NFY4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SEMA6DQ8NFY4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.09■□□□□ 0.65
SEMA6DQ8NFY4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SEMA6DQ8NFY4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SEMA6DQ8NFY4 AC096631.2-201ENST00000436136 790 ntBASIC19.09■□□□□ 0.65
SEMA6DQ8NFY4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SEMA6DQ8NFY4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SEMA6DQ8NFY4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.09■□□□□ 0.65
SEMA6DQ8NFY4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SEMA6DQ8NFY4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SEMA6DQ8NFY4 PKD1P6-201ENST00000343738 4769 ntBASIC19.09■□□□□ 0.65
SEMA6DQ8NFY4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SEMA6DQ8NFY4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SEMA6DQ8NFY4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.08■□□□□ 0.65
SEMA6DQ8NFY4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SEMA6DQ8NFY4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SEMA6DQ8NFY4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SEMA6DQ8NFY4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.08■□□□□ 0.64
SEMA6DQ8NFY4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.08■□□□□ 0.64
SEMA6DQ8NFY4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SEMA6DQ8NFY4 AL356740.2-201ENST00000601559 647 ntBASIC19.08■□□□□ 0.64
SEMA6DQ8NFY4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.08■□□□□ 0.64
SEMA6DQ8NFY4 MIR4466-201ENST00000606121 54 ntBASIC19.08■□□□□ 0.64
SEMA6DQ8NFY4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SEMA6DQ8NFY4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SEMA6DQ8NFY4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SEMA6DQ8NFY4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.08■□□□□ 0.64
SEMA6DQ8NFY4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SEMA6DQ8NFY4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SEMA6DQ8NFY4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEMA6DQ8NFY4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SEMA6DQ8NFY4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SEMA6DQ8NFY4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEMA6DQ8NFY4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms