Protein–RNA interactions for Protein: Q8N0V4

LGI2, Leucine-rich repeat LGI family member 2, humanhuman

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI2Q8N0V4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LGI2Q8N0V4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
LGI2Q8N0V4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
LGI2Q8N0V4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
LGI2Q8N0V4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.67■■□□□ 1.22
LGI2Q8N0V4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LGI2Q8N0V4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.67■■□□□ 1.22
LGI2Q8N0V4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.67■■□□□ 1.22
LGI2Q8N0V4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.67■■□□□ 1.22
LGI2Q8N0V4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
LGI2Q8N0V4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
LGI2Q8N0V4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LGI2Q8N0V4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LGI2Q8N0V4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
LGI2Q8N0V4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.67■■□□□ 1.22
LGI2Q8N0V4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LGI2Q8N0V4 DUSP8P5-201ENST00000422884 1815 ntBASIC22.66■■□□□ 1.22
LGI2Q8N0V4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.66■■□□□ 1.22
LGI2Q8N0V4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.66■■□□□ 1.22
LGI2Q8N0V4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LGI2Q8N0V4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.66■■□□□ 1.22
LGI2Q8N0V4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
LGI2Q8N0V4 MIR935-201ENST00000401179 91 ntBASIC22.66■■□□□ 1.22
LGI2Q8N0V4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LGI2Q8N0V4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LGI2Q8N0V4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LGI2Q8N0V4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.66■■□□□ 1.22
LGI2Q8N0V4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LGI2Q8N0V4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.66■■□□□ 1.22
LGI2Q8N0V4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.66■■□□□ 1.22
LGI2Q8N0V4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LGI2Q8N0V4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LGI2Q8N0V4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
LGI2Q8N0V4 IRS3P-201ENST00000223076 1006 ntBASIC22.65■■□□□ 1.22
LGI2Q8N0V4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LGI2Q8N0V4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LGI2Q8N0V4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.65■■□□□ 1.22
LGI2Q8N0V4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.65■■□□□ 1.22
LGI2Q8N0V4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
LGI2Q8N0V4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LGI2Q8N0V4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
LGI2Q8N0V4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.64■■□□□ 1.22
LGI2Q8N0V4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.64■■□□□ 1.21
LGI2Q8N0V4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.64■■□□□ 1.21
LGI2Q8N0V4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.64■■□□□ 1.21
LGI2Q8N0V4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.64■■□□□ 1.21
LGI2Q8N0V4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
LGI2Q8N0V4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
LGI2Q8N0V4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.63■■□□□ 1.21
LGI2Q8N0V4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
LGI2Q8N0V4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LGI2Q8N0V4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LGI2Q8N0V4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.63■■□□□ 1.21
LGI2Q8N0V4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LGI2Q8N0V4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LGI2Q8N0V4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.63■■□□□ 1.21
LGI2Q8N0V4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LGI2Q8N0V4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.63■■□□□ 1.21
LGI2Q8N0V4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.63■■□□□ 1.21
LGI2Q8N0V4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.63■■□□□ 1.21
LGI2Q8N0V4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.63■■□□□ 1.21
LGI2Q8N0V4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LGI2Q8N0V4 AL031602.1-201ENST00000633169 911 ntBASIC22.63■■□□□ 1.21
LGI2Q8N0V4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LGI2Q8N0V4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LGI2Q8N0V4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.63■■□□□ 1.21
LGI2Q8N0V4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LGI2Q8N0V4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
LGI2Q8N0V4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.62■■□□□ 1.21
LGI2Q8N0V4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LGI2Q8N0V4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LGI2Q8N0V4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LGI2Q8N0V4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.62■■□□□ 1.21
LGI2Q8N0V4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.62■■□□□ 1.21
LGI2Q8N0V4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LGI2Q8N0V4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LGI2Q8N0V4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
LGI2Q8N0V4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.62■■□□□ 1.21
LGI2Q8N0V4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.62■■□□□ 1.21
LGI2Q8N0V4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
LGI2Q8N0V4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.61■■□□□ 1.21
LGI2Q8N0V4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LGI2Q8N0V4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LGI2Q8N0V4 AC068587.7-201ENST00000641602 218 ntBASIC22.61■■□□□ 1.21
LGI2Q8N0V4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LGI2Q8N0V4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.61■■□□□ 1.21
LGI2Q8N0V4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
LGI2Q8N0V4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.6■■□□□ 1.21
LGI2Q8N0V4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.6■■□□□ 1.21
LGI2Q8N0V4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LGI2Q8N0V4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
LGI2Q8N0V4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LGI2Q8N0V4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
LGI2Q8N0V4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LGI2Q8N0V4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
LGI2Q8N0V4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.6■■□□□ 1.21
LGI2Q8N0V4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.6■■□□□ 1.21
LGI2Q8N0V4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LGI2Q8N0V4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LGI2Q8N0V4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms