Protein–RNA interactions for Protein: Q8IYG6

LRRC56, Leucine-rich repeat-containing protein 56, humanhuman

Predicted RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56Q8IYG6 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.27■■□□□ 1
LRRC56Q8IYG6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC56Q8IYG6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
LRRC56Q8IYG6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
LRRC56Q8IYG6 AC106739.1-201ENST00000617035 715 ntBASIC21.27■■□□□ 1
LRRC56Q8IYG6 AL031602.1-201ENST00000633169 911 ntBASIC21.27■■□□□ 1
LRRC56Q8IYG6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC56Q8IYG6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
LRRC56Q8IYG6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
LRRC56Q8IYG6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
LRRC56Q8IYG6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC56Q8IYG6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC56Q8IYG6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC56Q8IYG6 ESRRAP2-201ENST00000418437 1549 ntBASIC21.26■□□□□ 0.99
LRRC56Q8IYG6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC56Q8IYG6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC56Q8IYG6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.26■□□□□ 0.99
LRRC56Q8IYG6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.26■□□□□ 0.99
LRRC56Q8IYG6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
LRRC56Q8IYG6 LINC01960-201ENST00000563759 1884 ntBASIC21.26■□□□□ 0.99
LRRC56Q8IYG6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC56Q8IYG6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC56Q8IYG6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC56Q8IYG6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC56Q8IYG6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC56Q8IYG6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC56Q8IYG6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC56Q8IYG6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.25■□□□□ 0.99
LRRC56Q8IYG6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC56Q8IYG6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.25■□□□□ 0.99
LRRC56Q8IYG6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
LRRC56Q8IYG6 PBX2P1-201ENST00000493219 1291 ntBASIC21.25■□□□□ 0.99
LRRC56Q8IYG6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.25■□□□□ 0.99
LRRC56Q8IYG6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.25■□□□□ 0.99
LRRC56Q8IYG6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC56Q8IYG6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC56Q8IYG6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
LRRC56Q8IYG6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC56Q8IYG6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC56Q8IYG6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.24■□□□□ 0.99
LRRC56Q8IYG6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC56Q8IYG6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.24■□□□□ 0.99
LRRC56Q8IYG6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC56Q8IYG6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.24■□□□□ 0.99
LRRC56Q8IYG6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
LRRC56Q8IYG6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.24■□□□□ 0.99
LRRC56Q8IYG6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.24■□□□□ 0.99
LRRC56Q8IYG6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC56Q8IYG6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC56Q8IYG6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC56Q8IYG6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC56Q8IYG6 SLC47A1P1-202ENST00000449666 945 ntBASIC21.23■□□□□ 0.99
LRRC56Q8IYG6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC56Q8IYG6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.23■□□□□ 0.99
LRRC56Q8IYG6 AL139246.5-201ENST00000606645 996 ntBASIC21.23■□□□□ 0.99
LRRC56Q8IYG6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
LRRC56Q8IYG6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
LRRC56Q8IYG6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC56Q8IYG6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC56Q8IYG6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC56Q8IYG6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC56Q8IYG6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC56Q8IYG6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC56Q8IYG6 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.22■□□□□ 0.99
LRRC56Q8IYG6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.22■□□□□ 0.99
LRRC56Q8IYG6 AL031432.3-201ENST00000607698 485 ntBASIC21.22■□□□□ 0.99
LRRC56Q8IYG6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.22■□□□□ 0.99
LRRC56Q8IYG6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.22■□□□□ 0.99
LRRC56Q8IYG6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC56Q8IYG6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC56Q8IYG6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRC56Q8IYG6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC56Q8IYG6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC56Q8IYG6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC56Q8IYG6 AC127496.7-201ENST00000625110 1798 ntBASIC21.21■□□□□ 0.99
LRRC56Q8IYG6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.21■□□□□ 0.99
LRRC56Q8IYG6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC56Q8IYG6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC56Q8IYG6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC56Q8IYG6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LRRC56Q8IYG6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
LRRC56Q8IYG6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
LRRC56Q8IYG6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
LRRC56Q8IYG6 AC233723.2-201ENST00000623798 2106 ntBASIC21.2■□□□□ 0.98
LRRC56Q8IYG6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC56Q8IYG6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC56Q8IYG6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
LRRC56Q8IYG6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
LRRC56Q8IYG6 BX842568.3-201ENST00000418104 571 ntBASIC21.2■□□□□ 0.98
LRRC56Q8IYG6 CA15P2-201ENST00000611168 834 ntBASIC21.2■□□□□ 0.98
LRRC56Q8IYG6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.2■□□□□ 0.98
LRRC56Q8IYG6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.2■□□□□ 0.98
LRRC56Q8IYG6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC56Q8IYG6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC56Q8IYG6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC56Q8IYG6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC56Q8IYG6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LRRC56Q8IYG6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC56Q8IYG6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.19■□□□□ 0.98
LRRC56Q8IYG6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms