Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM42Q8IWZ5 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRIM42Q8IWZ5 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.85■■□□□ 1.09
TRIM42Q8IWZ5 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM42Q8IWZ5 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM42Q8IWZ5 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.85■■□□□ 1.09
TRIM42Q8IWZ5 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM42Q8IWZ5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.85■■□□□ 1.09
TRIM42Q8IWZ5 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.85■■□□□ 1.09
TRIM42Q8IWZ5 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM42Q8IWZ5 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM42Q8IWZ5 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.85■■□□□ 1.09
TRIM42Q8IWZ5 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM42Q8IWZ5 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM42Q8IWZ5 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
TRIM42Q8IWZ5 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM42Q8IWZ5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM42Q8IWZ5 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM42Q8IWZ5 AC144652.1-201ENST00000609974 1624 ntBASIC21.84■■□□□ 1.09
TRIM42Q8IWZ5 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM42Q8IWZ5 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.84■■□□□ 1.09
TRIM42Q8IWZ5 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
TRIM42Q8IWZ5 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.84■■□□□ 1.09
TRIM42Q8IWZ5 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM42Q8IWZ5 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM42Q8IWZ5 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.84■■□□□ 1.09
TRIM42Q8IWZ5 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.84■■□□□ 1.09
TRIM42Q8IWZ5 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.84■■□□□ 1.09
TRIM42Q8IWZ5 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
TRIM42Q8IWZ5 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM42Q8IWZ5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM42Q8IWZ5 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
TRIM42Q8IWZ5 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM42Q8IWZ5 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM42Q8IWZ5 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM42Q8IWZ5 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.83■■□□□ 1.09
TRIM42Q8IWZ5 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM42Q8IWZ5 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.83■■□□□ 1.09
TRIM42Q8IWZ5 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM42Q8IWZ5 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM42Q8IWZ5 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM42Q8IWZ5 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.83■■□□□ 1.09
TRIM42Q8IWZ5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM42Q8IWZ5 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM42Q8IWZ5 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM42Q8IWZ5 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.83■■□□□ 1.08
TRIM42Q8IWZ5 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM42Q8IWZ5 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM42Q8IWZ5 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
TRIM42Q8IWZ5 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM42Q8IWZ5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM42Q8IWZ5 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM42Q8IWZ5 BHLHE23-202ENST00000612929 1109 ntBASIC21.82■■□□□ 1.08
TRIM42Q8IWZ5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.81■■□□□ 1.08
TRIM42Q8IWZ5 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM42Q8IWZ5 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM42Q8IWZ5 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM42Q8IWZ5 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM42Q8IWZ5 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
TRIM42Q8IWZ5 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM42Q8IWZ5 AC026310.3-201ENST00000625186 2373 ntBASIC21.81■■□□□ 1.08
TRIM42Q8IWZ5 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM42Q8IWZ5 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM42Q8IWZ5 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM42Q8IWZ5 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM42Q8IWZ5 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM42Q8IWZ5 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM42Q8IWZ5 AF131216.4-201ENST00000638924 1588 ntBASIC21.8■■□□□ 1.08
TRIM42Q8IWZ5 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.8■■□□□ 1.08
TRIM42Q8IWZ5 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM42Q8IWZ5 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.79■■□□□ 1.08
TRIM42Q8IWZ5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM42Q8IWZ5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM42Q8IWZ5 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM42Q8IWZ5 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM42Q8IWZ5 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM42Q8IWZ5 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
TRIM42Q8IWZ5 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM42Q8IWZ5 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM42Q8IWZ5 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM42Q8IWZ5 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM42Q8IWZ5 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
TRIM42Q8IWZ5 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM42Q8IWZ5 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM42Q8IWZ5 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM42Q8IWZ5 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM42Q8IWZ5 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
TRIM42Q8IWZ5 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
TRIM42Q8IWZ5 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM42Q8IWZ5 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM42Q8IWZ5 AC139795.1-202ENST00000500444 432 ntBASIC21.78■■□□□ 1.08
TRIM42Q8IWZ5 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.78■■□□□ 1.08
TRIM42Q8IWZ5 AC120024.1-201ENST00000562672 995 ntBASIC21.78■■□□□ 1.08
TRIM42Q8IWZ5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.78■■□□□ 1.08
TRIM42Q8IWZ5 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.78■■□□□ 1.08
TRIM42Q8IWZ5 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM42Q8IWZ5 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.78■■□□□ 1.08
TRIM42Q8IWZ5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM42Q8IWZ5 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.78■■□□□ 1.08
TRIM42Q8IWZ5 FAM99A-202ENST00000538190 1989 ntBASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms