Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
APLFQ8IW19 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
APLFQ8IW19 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
APLFQ8IW19 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.61■■□□□ 1.05
APLFQ8IW19 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.6■■□□□ 1.05
APLFQ8IW19 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.6■■□□□ 1.05
APLFQ8IW19 UNC93B3-201ENST00000308076 687 ntBASIC21.6■■□□□ 1.05
APLFQ8IW19 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
APLFQ8IW19 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
APLFQ8IW19 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.6■■□□□ 1.05
APLFQ8IW19 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.6■■□□□ 1.05
APLFQ8IW19 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
APLFQ8IW19 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
APLFQ8IW19 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
APLFQ8IW19 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
APLFQ8IW19 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
APLFQ8IW19 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
APLFQ8IW19 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.59■■□□□ 1.05
APLFQ8IW19 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
APLFQ8IW19 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.59■■□□□ 1.05
APLFQ8IW19 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.59■■□□□ 1.05
APLFQ8IW19 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
APLFQ8IW19 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
APLFQ8IW19 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
APLFQ8IW19 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.58■■□□□ 1.05
APLFQ8IW19 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.58■■□□□ 1.05
APLFQ8IW19 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
APLFQ8IW19 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
APLFQ8IW19 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.58■■□□□ 1.05
APLFQ8IW19 ZNRF2P3-201ENST00000424200 374 ntBASIC21.58■■□□□ 1.05
APLFQ8IW19 SRD5A1P1-201ENST00000442297 786 ntBASIC21.58■■□□□ 1.05
APLFQ8IW19 SUDS3P1-201ENST00000505831 966 ntBASIC21.58■■□□□ 1.05
APLFQ8IW19 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.58■■□□□ 1.05
APLFQ8IW19 AL136162.1-201ENST00000607711 1078 ntBASIC21.58■■□□□ 1.05
APLFQ8IW19 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
APLFQ8IW19 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
APLFQ8IW19 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
APLFQ8IW19 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
APLFQ8IW19 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
APLFQ8IW19 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
APLFQ8IW19 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
APLFQ8IW19 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
APLFQ8IW19 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
APLFQ8IW19 AL031432.3-201ENST00000607698 485 ntBASIC21.57■■□□□ 1.04
APLFQ8IW19 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
APLFQ8IW19 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
APLFQ8IW19 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
APLFQ8IW19 AC135279.3-201ENST00000610945 1311 ntBASIC21.56■■□□□ 1.04
APLFQ8IW19 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.56■■□□□ 1.04
APLFQ8IW19 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
APLFQ8IW19 EDA-201ENST00000338901 1233 ntBASIC21.56■■□□□ 1.04
APLFQ8IW19 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.56■■□□□ 1.04
APLFQ8IW19 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.56■■□□□ 1.04
APLFQ8IW19 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
APLFQ8IW19 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.56■■□□□ 1.04
APLFQ8IW19 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.56■■□□□ 1.04
APLFQ8IW19 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
APLFQ8IW19 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.56■■□□□ 1.04
APLFQ8IW19 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
APLFQ8IW19 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
APLFQ8IW19 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
APLFQ8IW19 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
APLFQ8IW19 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
APLFQ8IW19 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.55■■□□□ 1.04
APLFQ8IW19 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
APLFQ8IW19 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
APLFQ8IW19 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.55■■□□□ 1.04
APLFQ8IW19 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
APLFQ8IW19 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
APLFQ8IW19 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
APLFQ8IW19 RARRES2P6-201ENST00000567333 442 ntBASIC21.55■■□□□ 1.04
APLFQ8IW19 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
APLFQ8IW19 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
APLFQ8IW19 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
APLFQ8IW19 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
APLFQ8IW19 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
APLFQ8IW19 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
APLFQ8IW19 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.54■■□□□ 1.04
APLFQ8IW19 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
APLFQ8IW19 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
APLFQ8IW19 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
APLFQ8IW19 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
APLFQ8IW19 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
APLFQ8IW19 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
APLFQ8IW19 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
APLFQ8IW19 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
APLFQ8IW19 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.53■■□□□ 1.04
APLFQ8IW19 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
APLFQ8IW19 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.53■■□□□ 1.04
APLFQ8IW19 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
APLFQ8IW19 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
APLFQ8IW19 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
APLFQ8IW19 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
APLFQ8IW19 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.53■■□□□ 1.04
APLFQ8IW19 AL355001.2-201ENST00000620617 1191 ntBASIC21.53■■□□□ 1.04
APLFQ8IW19 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
APLFQ8IW19 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
APLFQ8IW19 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
APLFQ8IW19 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
APLFQ8IW19 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms