Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SHFQ7M4L6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SHFQ7M4L6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHFQ7M4L6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SHFQ7M4L6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHFQ7M4L6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SHFQ7M4L6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SHFQ7M4L6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHFQ7M4L6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.8■□□□□ 0.76
SHFQ7M4L6 SNX5-217ENST00000606557 1087 ntBASIC19.8■□□□□ 0.76
SHFQ7M4L6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHFQ7M4L6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SHFQ7M4L6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SHFQ7M4L6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SHFQ7M4L6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHFQ7M4L6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SHFQ7M4L6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHFQ7M4L6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHFQ7M4L6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHFQ7M4L6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SHFQ7M4L6 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
SHFQ7M4L6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.79■□□□□ 0.76
SHFQ7M4L6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.79■□□□□ 0.76
SHFQ7M4L6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SHFQ7M4L6 AC103724.3-201ENST00000564481 992 ntBASIC19.79■□□□□ 0.76
SHFQ7M4L6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.79■□□□□ 0.76
SHFQ7M4L6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.79■□□□□ 0.76
SHFQ7M4L6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.79■□□□□ 0.76
SHFQ7M4L6 AC137630.3-201ENST00000607245 391 ntBASIC19.79■□□□□ 0.76
SHFQ7M4L6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SHFQ7M4L6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.79■□□□□ 0.76
SHFQ7M4L6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SHFQ7M4L6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHFQ7M4L6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHFQ7M4L6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SHFQ7M4L6 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHFQ7M4L6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SHFQ7M4L6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHFQ7M4L6 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHFQ7M4L6 KRT8P33-201ENST00000508125 1423 ntBASIC19.77■□□□□ 0.76
SHFQ7M4L6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHFQ7M4L6 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHFQ7M4L6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHFQ7M4L6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SHFQ7M4L6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHFQ7M4L6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHFQ7M4L6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.77■□□□□ 0.76
SHFQ7M4L6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.77■□□□□ 0.76
SHFQ7M4L6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.77■□□□□ 0.76
SHFQ7M4L6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SHFQ7M4L6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.75
SHFQ7M4L6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
SHFQ7M4L6 AC144652.1-201ENST00000609974 1624 ntBASIC19.76■□□□□ 0.75
SHFQ7M4L6 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.76■□□□□ 0.75
SHFQ7M4L6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHFQ7M4L6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.76■□□□□ 0.75
SHFQ7M4L6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHFQ7M4L6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHFQ7M4L6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.76■□□□□ 0.75
SHFQ7M4L6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SHFQ7M4L6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.76■□□□□ 0.75
SHFQ7M4L6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHFQ7M4L6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHFQ7M4L6 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.76■□□□□ 0.75
SHFQ7M4L6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.76■□□□□ 0.75
SHFQ7M4L6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHFQ7M4L6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SHFQ7M4L6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHFQ7M4L6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHFQ7M4L6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.76■□□□□ 0.75
SHFQ7M4L6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHFQ7M4L6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHFQ7M4L6 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHFQ7M4L6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SHFQ7M4L6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHFQ7M4L6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHFQ7M4L6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHFQ7M4L6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SHFQ7M4L6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SHFQ7M4L6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHFQ7M4L6 AC026310.3-201ENST00000625186 2373 ntBASIC19.75■□□□□ 0.75
SHFQ7M4L6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.75■□□□□ 0.75
SHFQ7M4L6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
SHFQ7M4L6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SHFQ7M4L6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHFQ7M4L6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHFQ7M4L6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.74■□□□□ 0.75
SHFQ7M4L6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHFQ7M4L6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHFQ7M4L6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHFQ7M4L6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHFQ7M4L6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.74■□□□□ 0.75
SHFQ7M4L6 AL031848.2-201ENST00000607670 837 ntBASIC19.74■□□□□ 0.75
SHFQ7M4L6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.74■□□□□ 0.75
SHFQ7M4L6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.74■□□□□ 0.75
SHFQ7M4L6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.74■□□□□ 0.75
SHFQ7M4L6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SHFQ7M4L6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.74■□□□□ 0.75
SHFQ7M4L6 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.74■□□□□ 0.75
SHFQ7M4L6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms