Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
C9orf139Q6ZV77 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
C9orf139Q6ZV77 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
C9orf139Q6ZV77 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC17.8■□□□□ 0.44
C9orf139Q6ZV77 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
C9orf139Q6ZV77 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
C9orf139Q6ZV77 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
C9orf139Q6ZV77 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
C9orf139Q6ZV77 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
C9orf139Q6ZV77 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
C9orf139Q6ZV77 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
C9orf139Q6ZV77 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
C9orf139Q6ZV77 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
C9orf139Q6ZV77 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
C9orf139Q6ZV77 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.79■□□□□ 0.44
C9orf139Q6ZV77 NTF6G-201ENST00000591094 616 ntBASIC17.79■□□□□ 0.44
C9orf139Q6ZV77 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
C9orf139Q6ZV77 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.79■□□□□ 0.44
C9orf139Q6ZV77 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
C9orf139Q6ZV77 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
C9orf139Q6ZV77 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
C9orf139Q6ZV77 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
C9orf139Q6ZV77 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
C9orf139Q6ZV77 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
C9orf139Q6ZV77 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
C9orf139Q6ZV77 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
C9orf139Q6ZV77 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
C9orf139Q6ZV77 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.78■□□□□ 0.44
C9orf139Q6ZV77 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.78■□□□□ 0.44
C9orf139Q6ZV77 RARRES2P11-201ENST00000635158 484 ntBASIC17.78■□□□□ 0.44
C9orf139Q6ZV77 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
C9orf139Q6ZV77 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
C9orf139Q6ZV77 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
C9orf139Q6ZV77 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
C9orf139Q6ZV77 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.78■□□□□ 0.44
C9orf139Q6ZV77 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.77■□□□□ 0.44
C9orf139Q6ZV77 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
C9orf139Q6ZV77 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.77■□□□□ 0.44
C9orf139Q6ZV77 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
C9orf139Q6ZV77 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.77■□□□□ 0.44
C9orf139Q6ZV77 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.77■□□□□ 0.44
C9orf139Q6ZV77 AC004812.2-201ENST00000611079 2094 ntBASIC17.77■□□□□ 0.44
C9orf139Q6ZV77 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
C9orf139Q6ZV77 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.77■□□□□ 0.44
C9orf139Q6ZV77 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.77■□□□□ 0.44
C9orf139Q6ZV77 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.77■□□□□ 0.44
C9orf139Q6ZV77 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
C9orf139Q6ZV77 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.77■□□□□ 0.44
C9orf139Q6ZV77 IKBKGP1-201ENST00000612193 1073 ntBASIC17.77■□□□□ 0.44
C9orf139Q6ZV77 AC087239.1-201ENST00000622671 572 ntBASIC17.77■□□□□ 0.44
C9orf139Q6ZV77 AC092437.1-201ENST00000624794 1048 ntBASIC17.77■□□□□ 0.44
C9orf139Q6ZV77 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
C9orf139Q6ZV77 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.77■□□□□ 0.44
C9orf139Q6ZV77 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
C9orf139Q6ZV77 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
C9orf139Q6ZV77 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
C9orf139Q6ZV77 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
C9orf139Q6ZV77 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf139Q6ZV77 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.76■□□□□ 0.43
C9orf139Q6ZV77 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf139Q6ZV77 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf139Q6ZV77 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.76■□□□□ 0.43
C9orf139Q6ZV77 TPRG1LP1-201ENST00000598702 760 ntBASIC17.76■□□□□ 0.43
C9orf139Q6ZV77 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf139Q6ZV77 AC004687.1-201ENST00000579003 1625 ntBASIC17.76■□□□□ 0.43
C9orf139Q6ZV77 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
C9orf139Q6ZV77 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf139Q6ZV77 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf139Q6ZV77 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
C9orf139Q6ZV77 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.75■□□□□ 0.43
C9orf139Q6ZV77 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.75■□□□□ 0.43
C9orf139Q6ZV77 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
C9orf139Q6ZV77 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.75■□□□□ 0.43
C9orf139Q6ZV77 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf139Q6ZV77 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C9orf139Q6ZV77 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.74■□□□□ 0.43
C9orf139Q6ZV77 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf139Q6ZV77 AL353803.4-201ENST00000565882 1934 ntBASIC17.74■□□□□ 0.43
C9orf139Q6ZV77 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
C9orf139Q6ZV77 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf139Q6ZV77 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf139Q6ZV77 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf139Q6ZV77 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
C9orf139Q6ZV77 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf139Q6ZV77 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf139Q6ZV77 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.74■□□□□ 0.43
C9orf139Q6ZV77 AC010141.3-201ENST00000456659 717 ntBASIC17.74■□□□□ 0.43
C9orf139Q6ZV77 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.74■□□□□ 0.43
C9orf139Q6ZV77 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
C9orf139Q6ZV77 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf139Q6ZV77 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
C9orf139Q6ZV77 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
C9orf139Q6ZV77 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.73■□□□□ 0.43
C9orf139Q6ZV77 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
C9orf139Q6ZV77 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.73■□□□□ 0.43
C9orf139Q6ZV77 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C9orf139Q6ZV77 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.73■□□□□ 0.43
C9orf139Q6ZV77 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
C9orf139Q6ZV77 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.73■□□□□ 0.43
C9orf139Q6ZV77 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms