Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTL4Q6ZR62 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTL4Q6ZR62 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTL4Q6ZR62 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTL4Q6ZR62 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTL4Q6ZR62 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.51■□□□□ 0.87
RTL4Q6ZR62 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTL4Q6ZR62 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTL4Q6ZR62 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTL4Q6ZR62 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.51■□□□□ 0.87
RTL4Q6ZR62 AP001330.3-201ENST00000520123 633 ntBASIC20.51■□□□□ 0.87
RTL4Q6ZR62 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTL4Q6ZR62 AF213884.3-201ENST00000563833 479 ntBASIC20.51■□□□□ 0.87
RTL4Q6ZR62 DUX4L4-201ENST00000566884 1269 ntBASIC20.51■□□□□ 0.87
RTL4Q6ZR62 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTL4Q6ZR62 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTL4Q6ZR62 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTL4Q6ZR62 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTL4Q6ZR62 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTL4Q6ZR62 LINC01529-204ENST00000636474 1715 ntBASIC20.5■□□□□ 0.87
RTL4Q6ZR62 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTL4Q6ZR62 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RTL4Q6ZR62 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.5■□□□□ 0.87
RTL4Q6ZR62 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RTL4Q6ZR62 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTL4Q6ZR62 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.5■□□□□ 0.87
RTL4Q6ZR62 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.5■□□□□ 0.87
RTL4Q6ZR62 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTL4Q6ZR62 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTL4Q6ZR62 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTL4Q6ZR62 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
RTL4Q6ZR62 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RTL4Q6ZR62 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RTL4Q6ZR62 MIR939-201ENST00000401314 82 ntBASIC20.49■□□□□ 0.87
RTL4Q6ZR62 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
RTL4Q6ZR62 AL136967.2-201ENST00000623968 743 ntBASIC20.49■□□□□ 0.87
RTL4Q6ZR62 PKD1P6-201ENST00000343738 4769 ntBASIC20.49■□□□□ 0.87
RTL4Q6ZR62 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RTL4Q6ZR62 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RTL4Q6ZR62 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RTL4Q6ZR62 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTL4Q6ZR62 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTL4Q6ZR62 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTL4Q6ZR62 AC091305.1-201ENST00000479476 895 ntBASIC20.48■□□□□ 0.87
RTL4Q6ZR62 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RTL4Q6ZR62 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.48■□□□□ 0.87
RTL4Q6ZR62 AC027682.1-201ENST00000562846 899 ntBASIC20.48■□□□□ 0.87
RTL4Q6ZR62 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
RTL4Q6ZR62 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
RTL4Q6ZR62 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTL4Q6ZR62 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
RTL4Q6ZR62 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RTL4Q6ZR62 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RTL4Q6ZR62 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RTL4Q6ZR62 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL4Q6ZR62 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.47■□□□□ 0.87
RTL4Q6ZR62 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.47■□□□□ 0.87
RTL4Q6ZR62 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.47■□□□□ 0.87
RTL4Q6ZR62 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL4Q6ZR62 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.47■□□□□ 0.87
RTL4Q6ZR62 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.47■□□□□ 0.87
RTL4Q6ZR62 AL499627.2-201ENST00000606283 725 ntBASIC20.47■□□□□ 0.87
RTL4Q6ZR62 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL4Q6ZR62 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.47■□□□□ 0.87
RTL4Q6ZR62 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RTL4Q6ZR62 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL4Q6ZR62 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RTL4Q6ZR62 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTL4Q6ZR62 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.46■□□□□ 0.87
RTL4Q6ZR62 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RTL4Q6ZR62 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
RTL4Q6ZR62 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.46■□□□□ 0.87
RTL4Q6ZR62 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RTL4Q6ZR62 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.46■□□□□ 0.87
RTL4Q6ZR62 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.46■□□□□ 0.87
RTL4Q6ZR62 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
RTL4Q6ZR62 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTL4Q6ZR62 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
RTL4Q6ZR62 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTL4Q6ZR62 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTL4Q6ZR62 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTL4Q6ZR62 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTL4Q6ZR62 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.45■□□□□ 0.86
RTL4Q6ZR62 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.45■□□□□ 0.86
RTL4Q6ZR62 AC008764.7-201ENST00000593779 1081 ntBASIC20.45■□□□□ 0.86
RTL4Q6ZR62 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTL4Q6ZR62 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RTL4Q6ZR62 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.45■□□□□ 0.86
RTL4Q6ZR62 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RTL4Q6ZR62 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTL4Q6ZR62 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
RTL4Q6ZR62 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RTL4Q6ZR62 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTL4Q6ZR62 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTL4Q6ZR62 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.45■□□□□ 0.86
RTL4Q6ZR62 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
RTL4Q6ZR62 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RTL4Q6ZR62 RASA4CP-201ENST00000424092 1398 ntBASIC20.45■□□□□ 0.86
RTL4Q6ZR62 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.45■□□□□ 0.86
RTL4Q6ZR62 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms