Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LPCAT4Q643R3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.72■□□□□ 0.91
LPCAT4Q643R3 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.72■□□□□ 0.91
LPCAT4Q643R3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LPCAT4Q643R3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LPCAT4Q643R3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
LPCAT4Q643R3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.71■□□□□ 0.91
LPCAT4Q643R3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
LPCAT4Q643R3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LPCAT4Q643R3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LPCAT4Q643R3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.71■□□□□ 0.91
LPCAT4Q643R3 AC131274.2-201ENST00000580697 1507 ntBASIC20.71■□□□□ 0.91
LPCAT4Q643R3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LPCAT4Q643R3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
LPCAT4Q643R3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LPCAT4Q643R3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LPCAT4Q643R3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LPCAT4Q643R3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
LPCAT4Q643R3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LPCAT4Q643R3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.7■□□□□ 0.9
LPCAT4Q643R3 AC244015.2-201ENST00000616358 1861 ntBASIC20.7■□□□□ 0.9
LPCAT4Q643R3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LPCAT4Q643R3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LPCAT4Q643R3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LPCAT4Q643R3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
LPCAT4Q643R3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
LPCAT4Q643R3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LPCAT4Q643R3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.69■□□□□ 0.9
LPCAT4Q643R3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LPCAT4Q643R3 AC092296.2-201ENST00000589470 999 ntBASIC20.69■□□□□ 0.9
LPCAT4Q643R3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
LPCAT4Q643R3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
LPCAT4Q643R3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LPCAT4Q643R3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.69■□□□□ 0.9
LPCAT4Q643R3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LPCAT4Q643R3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LPCAT4Q643R3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
LPCAT4Q643R3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LPCAT4Q643R3 AC007952.6-201ENST00000573168 2673 ntBASIC20.68■□□□□ 0.9
LPCAT4Q643R3 AC003957.1-201ENST00000625108 2673 ntBASIC20.68■□□□□ 0.9
LPCAT4Q643R3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
LPCAT4Q643R3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
LPCAT4Q643R3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LPCAT4Q643R3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
LPCAT4Q643R3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LPCAT4Q643R3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.68■□□□□ 0.9
LPCAT4Q643R3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
LPCAT4Q643R3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LPCAT4Q643R3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LPCAT4Q643R3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LPCAT4Q643R3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LPCAT4Q643R3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
LPCAT4Q643R3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LPCAT4Q643R3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LPCAT4Q643R3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LPCAT4Q643R3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LPCAT4Q643R3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LPCAT4Q643R3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LPCAT4Q643R3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LPCAT4Q643R3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LPCAT4Q643R3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LPCAT4Q643R3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.67■□□□□ 0.9
LPCAT4Q643R3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
LPCAT4Q643R3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.66■□□□□ 0.9
LPCAT4Q643R3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
LPCAT4Q643R3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LPCAT4Q643R3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
LPCAT4Q643R3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LPCAT4Q643R3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LPCAT4Q643R3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.66■□□□□ 0.9
LPCAT4Q643R3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.66■□□□□ 0.9
LPCAT4Q643R3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.66■□□□□ 0.9
LPCAT4Q643R3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LPCAT4Q643R3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LPCAT4Q643R3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
LPCAT4Q643R3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LPCAT4Q643R3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
LPCAT4Q643R3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
LPCAT4Q643R3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LPCAT4Q643R3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LPCAT4Q643R3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LPCAT4Q643R3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LPCAT4Q643R3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.65■□□□□ 0.9
LPCAT4Q643R3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.65■□□□□ 0.9
LPCAT4Q643R3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.65■□□□□ 0.9
LPCAT4Q643R3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.65■□□□□ 0.9
LPCAT4Q643R3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LPCAT4Q643R3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LPCAT4Q643R3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LPCAT4Q643R3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
LPCAT4Q643R3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LPCAT4Q643R3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.65■□□□□ 0.9
LPCAT4Q643R3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LPCAT4Q643R3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.65■□□□□ 0.9
LPCAT4Q643R3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LPCAT4Q643R3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LPCAT4Q643R3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LPCAT4Q643R3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LPCAT4Q643R3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
LPCAT4Q643R3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms