Protein–RNA interactions for Protein: Q5MAI5

CDKL4, Cyclin-dependent kinase-like 4, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL4Q5MAI5 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDKL4Q5MAI5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDKL4Q5MAI5 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDKL4Q5MAI5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDKL4Q5MAI5 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.35■■□□□ 1.01
CDKL4Q5MAI5 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDKL4Q5MAI5 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CDKL4Q5MAI5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.35■■□□□ 1.01
CDKL4Q5MAI5 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDKL4Q5MAI5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDKL4Q5MAI5 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDKL4Q5MAI5 AC092053.2-201ENST00000640557 1818 ntBASIC21.34■■□□□ 1.01
CDKL4Q5MAI5 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.34■■□□□ 1.01
CDKL4Q5MAI5 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDKL4Q5MAI5 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.34■■□□□ 1.01
CDKL4Q5MAI5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.34■■□□□ 1.01
CDKL4Q5MAI5 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDKL4Q5MAI5 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.34■■□□□ 1.01
CDKL4Q5MAI5 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CDKL4Q5MAI5 MIR3181-201ENST00000578512 73 ntBASIC21.34■■□□□ 1.01
CDKL4Q5MAI5 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.34■■□□□ 1.01
CDKL4Q5MAI5 AL031602.1-201ENST00000633169 911 ntBASIC21.34■■□□□ 1.01
CDKL4Q5MAI5 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CDKL4Q5MAI5 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDKL4Q5MAI5 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDKL4Q5MAI5 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDKL4Q5MAI5 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.34■■□□□ 1.01
CDKL4Q5MAI5 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CDKL4Q5MAI5 EP400NL-214ENST00000641289 2402 ntBASIC21.33■■□□□ 1.01
CDKL4Q5MAI5 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
CDKL4Q5MAI5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDKL4Q5MAI5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDKL4Q5MAI5 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDKL4Q5MAI5 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.33■■□□□ 1.01
CDKL4Q5MAI5 AL138724.1-201ENST00000606771 1088 ntBASIC21.33■■□□□ 1.01
CDKL4Q5MAI5 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDKL4Q5MAI5 AC080038.3-201ENST00000623346 1952 ntBASIC21.33■■□□□ 1.01
CDKL4Q5MAI5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDKL4Q5MAI5 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
CDKL4Q5MAI5 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDKL4Q5MAI5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.33■■□□□ 1
CDKL4Q5MAI5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDKL4Q5MAI5 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDKL4Q5MAI5 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDKL4Q5MAI5 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CDKL4Q5MAI5 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.32■■□□□ 1
CDKL4Q5MAI5 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CDKL4Q5MAI5 AC137767.1-201ENST00000602918 1920 ntBASIC21.32■■□□□ 1
CDKL4Q5MAI5 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.32■■□□□ 1
CDKL4Q5MAI5 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CDKL4Q5MAI5 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.32■■□□□ 1
CDKL4Q5MAI5 DUX4L19-201ENST00000557448 1267 ntBASIC21.32■■□□□ 1
CDKL4Q5MAI5 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CDKL4Q5MAI5 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDKL4Q5MAI5 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CDKL4Q5MAI5 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CDKL4Q5MAI5 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.31■■□□□ 1
CDKL4Q5MAI5 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.31■■□□□ 1
CDKL4Q5MAI5 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDKL4Q5MAI5 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDKL4Q5MAI5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDKL4Q5MAI5 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.31■■□□□ 1
CDKL4Q5MAI5 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.31■■□□□ 1
CDKL4Q5MAI5 AC068587.7-201ENST00000641602 218 ntBASIC21.31■■□□□ 1
CDKL4Q5MAI5 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDKL4Q5MAI5 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDKL4Q5MAI5 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CDKL4Q5MAI5 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.31■■□□□ 1
CDKL4Q5MAI5 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDKL4Q5MAI5 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDKL4Q5MAI5 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDKL4Q5MAI5 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDKL4Q5MAI5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CDKL4Q5MAI5 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDKL4Q5MAI5 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDKL4Q5MAI5 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.3■■□□□ 1
CDKL4Q5MAI5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.3■■□□□ 1
CDKL4Q5MAI5 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.3■■□□□ 1
CDKL4Q5MAI5 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.3■■□□□ 1
CDKL4Q5MAI5 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.3■■□□□ 1
CDKL4Q5MAI5 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CDKL4Q5MAI5 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CDKL4Q5MAI5 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.29■■□□□ 1
CDKL4Q5MAI5 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.29■■□□□ 1
CDKL4Q5MAI5 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.29■■□□□ 1
CDKL4Q5MAI5 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CDKL4Q5MAI5 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDKL4Q5MAI5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDKL4Q5MAI5 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDKL4Q5MAI5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDKL4Q5MAI5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CDKL4Q5MAI5 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.29■■□□□ 1
CDKL4Q5MAI5 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDKL4Q5MAI5 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CDKL4Q5MAI5 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CDKL4Q5MAI5 OR2I1P-207ENST00000453522 948 ntBASIC21.29■■□□□ 1
CDKL4Q5MAI5 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.29■■□□□ 1
CDKL4Q5MAI5 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.29■■□□□ 1
CDKL4Q5MAI5 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CDKL4Q5MAI5 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms