Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.32■■□□□ 1.16
FNDC3BQ53EP0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.32■■□□□ 1.16
FNDC3BQ53EP0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.32■■□□□ 1.16
FNDC3BQ53EP0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.32■■□□□ 1.16
FNDC3BQ53EP0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.32■■□□□ 1.16
FNDC3BQ53EP0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
FNDC3BQ53EP0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.32■■□□□ 1.16
FNDC3BQ53EP0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.32■■□□□ 1.16
FNDC3BQ53EP0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.32■■□□□ 1.16
FNDC3BQ53EP0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.32■■□□□ 1.16
FNDC3BQ53EP0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.32■■□□□ 1.16
FNDC3BQ53EP0 AC068587.7-201ENST00000641602 218 ntBASIC22.32■■□□□ 1.16
FNDC3BQ53EP0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.32■■□□□ 1.16
FNDC3BQ53EP0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.32■■□□□ 1.16
FNDC3BQ53EP0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
FNDC3BQ53EP0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FNDC3BQ53EP0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
FNDC3BQ53EP0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
FNDC3BQ53EP0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FNDC3BQ53EP0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.31■■□□□ 1.16
FNDC3BQ53EP0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.31■■□□□ 1.16
FNDC3BQ53EP0 LINC02228-203ENST00000641970 1355 ntBASIC22.31■■□□□ 1.16
FNDC3BQ53EP0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
FNDC3BQ53EP0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.31■■□□□ 1.16
FNDC3BQ53EP0 KRT18P5-201ENST00000436075 1291 ntBASIC22.31■■□□□ 1.16
FNDC3BQ53EP0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.31■■□□□ 1.16
FNDC3BQ53EP0 CCDC92B-201ENST00000575506 885 ntBASIC22.31■■□□□ 1.16
FNDC3BQ53EP0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
FNDC3BQ53EP0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FNDC3BQ53EP0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
FNDC3BQ53EP0 ANOS2P-203ENST00000472227 1816 ntBASIC22.31■■□□□ 1.16
FNDC3BQ53EP0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.31■■□□□ 1.16
FNDC3BQ53EP0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
FNDC3BQ53EP0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
FNDC3BQ53EP0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.3■■□□□ 1.16
FNDC3BQ53EP0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
FNDC3BQ53EP0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.3■■□□□ 1.16
FNDC3BQ53EP0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
FNDC3BQ53EP0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
FNDC3BQ53EP0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
FNDC3BQ53EP0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
FNDC3BQ53EP0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
FNDC3BQ53EP0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
FNDC3BQ53EP0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
FNDC3BQ53EP0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.29■■□□□ 1.16
FNDC3BQ53EP0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
FNDC3BQ53EP0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
FNDC3BQ53EP0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.29■■□□□ 1.16
FNDC3BQ53EP0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.29■■□□□ 1.16
FNDC3BQ53EP0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.29■■□□□ 1.16
FNDC3BQ53EP0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.29■■□□□ 1.16
FNDC3BQ53EP0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.29■■□□□ 1.16
FNDC3BQ53EP0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.29■■□□□ 1.16
FNDC3BQ53EP0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
FNDC3BQ53EP0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
FNDC3BQ53EP0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
FNDC3BQ53EP0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
FNDC3BQ53EP0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
FNDC3BQ53EP0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
FNDC3BQ53EP0 AC010141.3-201ENST00000456659 717 ntBASIC22.28■■□□□ 1.16
FNDC3BQ53EP0 KRT18P14-201ENST00000534205 1250 ntBASIC22.28■■□□□ 1.16
FNDC3BQ53EP0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.28■■□□□ 1.16
FNDC3BQ53EP0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
FNDC3BQ53EP0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
FNDC3BQ53EP0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
FNDC3BQ53EP0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.28■■□□□ 1.16
FNDC3BQ53EP0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
FNDC3BQ53EP0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
FNDC3BQ53EP0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
FNDC3BQ53EP0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
FNDC3BQ53EP0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
FNDC3BQ53EP0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
FNDC3BQ53EP0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.27■■□□□ 1.16
FNDC3BQ53EP0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
FNDC3BQ53EP0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
FNDC3BQ53EP0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.27■■□□□ 1.16
FNDC3BQ53EP0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.27■■□□□ 1.16
FNDC3BQ53EP0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
FNDC3BQ53EP0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.27■■□□□ 1.16
FNDC3BQ53EP0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
FNDC3BQ53EP0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
FNDC3BQ53EP0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FNDC3BQ53EP0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
FNDC3BQ53EP0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FNDC3BQ53EP0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FNDC3BQ53EP0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.26■■□□□ 1.15
FNDC3BQ53EP0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FNDC3BQ53EP0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.26■■□□□ 1.15
FNDC3BQ53EP0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
FNDC3BQ53EP0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.26■■□□□ 1.15
FNDC3BQ53EP0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FNDC3BQ53EP0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FNDC3BQ53EP0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
FNDC3BQ53EP0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.25■■□□□ 1.15
FNDC3BQ53EP0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
FNDC3BQ53EP0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
FNDC3BQ53EP0 TERF1P2-201ENST00000583350 1212 ntBASIC22.25■■□□□ 1.15
FNDC3BQ53EP0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.25■■□□□ 1.15
FNDC3BQ53EP0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
FNDC3BQ53EP0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms