Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.32■□□□□ 0.36
CCL20P78556 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCL20P78556 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL20P78556 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL20P78556 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL20P78556 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.32■□□□□ 0.36
CCL20P78556 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CCL20P78556 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL20P78556 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCL20P78556 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL20P78556 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.31■□□□□ 0.36
CCL20P78556 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.31■□□□□ 0.36
CCL20P78556 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL20P78556 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL20P78556 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCL20P78556 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.31■□□□□ 0.36
CCL20P78556 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.31■□□□□ 0.36
CCL20P78556 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL20P78556 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.31■□□□□ 0.36
CCL20P78556 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCL20P78556 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL20P78556 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCL20P78556 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL20P78556 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CCL20P78556 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
CCL20P78556 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.3■□□□□ 0.36
CCL20P78556 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CCL20P78556 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CCL20P78556 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL20P78556 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL20P78556 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL20P78556 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.3■□□□□ 0.36
CCL20P78556 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL20P78556 RP9P-202ENST00000450133 1212 ntBASIC17.3■□□□□ 0.36
CCL20P78556 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.3■□□□□ 0.36
CCL20P78556 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCL20P78556 AC093536.1-201ENST00000569153 554 ntBASIC17.3■□□□□ 0.36
CCL20P78556 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCL20P78556 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL20P78556 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCL20P78556 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL20P78556 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL20P78556 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL20P78556 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL20P78556 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL20P78556 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL20P78556 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCL20P78556 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCL20P78556 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.29■□□□□ 0.36
CCL20P78556 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCL20P78556 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCL20P78556 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL20P78556 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.28■□□□□ 0.36
CCL20P78556 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL20P78556 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.28■□□□□ 0.36
CCL20P78556 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCL20P78556 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL20P78556 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.28■□□□□ 0.36
CCL20P78556 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL20P78556 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL20P78556 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.28■□□□□ 0.36
CCL20P78556 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL20P78556 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.28■□□□□ 0.36
CCL20P78556 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL20P78556 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.28■□□□□ 0.36
CCL20P78556 LINC01006-201ENST00000333319 2292 ntBASIC17.28■□□□□ 0.36
CCL20P78556 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL20P78556 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL20P78556 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL20P78556 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL20P78556 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.28■□□□□ 0.36
CCL20P78556 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL20P78556 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL20P78556 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL20P78556 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCL20P78556 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCL20P78556 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CCL20P78556 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.27■□□□□ 0.36
CCL20P78556 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL20P78556 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL20P78556 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL20P78556 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCL20P78556 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.27■□□□□ 0.35
CCL20P78556 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCL20P78556 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.27■□□□□ 0.35
CCL20P78556 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCL20P78556 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL20P78556 FEM1AP4-201ENST00000443167 1987 ntBASIC17.26■□□□□ 0.35
CCL20P78556 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCL20P78556 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL20P78556 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL20P78556 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.26■□□□□ 0.35
CCL20P78556 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CCL20P78556 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCL20P78556 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL20P78556 AC131274.2-201ENST00000580697 1507 ntBASIC17.26■□□□□ 0.35
CCL20P78556 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCL20P78556 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL20P78556 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CCL20P78556 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms