Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.68■■□□□ 1.22
IRX4P78413 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
IRX4P78413 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
IRX4P78413 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.68■■□□□ 1.22
IRX4P78413 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
IRX4P78413 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
IRX4P78413 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
IRX4P78413 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
IRX4P78413 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
IRX4P78413 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.67■■□□□ 1.22
IRX4P78413 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
IRX4P78413 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
IRX4P78413 IKBKGP1-201ENST00000612193 1073 ntBASIC22.67■■□□□ 1.22
IRX4P78413 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
IRX4P78413 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
IRX4P78413 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.66■■□□□ 1.22
IRX4P78413 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.66■■□□□ 1.22
IRX4P78413 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
IRX4P78413 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
IRX4P78413 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
IRX4P78413 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.66■■□□□ 1.22
IRX4P78413 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.66■■□□□ 1.22
IRX4P78413 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
IRX4P78413 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
IRX4P78413 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
IRX4P78413 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.66■■□□□ 1.22
IRX4P78413 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
IRX4P78413 AC233723.2-201ENST00000623798 2106 ntBASIC22.66■■□□□ 1.22
IRX4P78413 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
IRX4P78413 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
IRX4P78413 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.65■■□□□ 1.22
IRX4P78413 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.65■■□□□ 1.22
IRX4P78413 AC022517.1-201ENST00000592429 346 ntBASIC22.65■■□□□ 1.22
IRX4P78413 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.65■■□□□ 1.22
IRX4P78413 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
IRX4P78413 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
IRX4P78413 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
IRX4P78413 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
IRX4P78413 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
IRX4P78413 AC009102.2-201ENST00000606772 1639 ntBASIC22.64■■□□□ 1.22
IRX4P78413 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
IRX4P78413 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
IRX4P78413 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
IRX4P78413 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
IRX4P78413 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
IRX4P78413 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
IRX4P78413 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
IRX4P78413 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.64■■□□□ 1.21
IRX4P78413 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
IRX4P78413 AL117328.2-201ENST00000624617 1940 ntBASIC22.63■■□□□ 1.21
IRX4P78413 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
IRX4P78413 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
IRX4P78413 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
IRX4P78413 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
IRX4P78413 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
IRX4P78413 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
IRX4P78413 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.63■■□□□ 1.21
IRX4P78413 AC034268.1-201ENST00000441047 882 ntBASIC22.63■■□□□ 1.21
IRX4P78413 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.63■■□□□ 1.21
IRX4P78413 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.63■■□□□ 1.21
IRX4P78413 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
IRX4P78413 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
IRX4P78413 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
IRX4P78413 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
IRX4P78413 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
IRX4P78413 C1orf229-201ENST00000623686 2258 ntBASIC22.62■■□□□ 1.21
IRX4P78413 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
IRX4P78413 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
IRX4P78413 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
IRX4P78413 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
IRX4P78413 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
IRX4P78413 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
IRX4P78413 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.62■■□□□ 1.21
IRX4P78413 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
IRX4P78413 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
IRX4P78413 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
IRX4P78413 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.62■■□□□ 1.21
IRX4P78413 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.62■■□□□ 1.21
IRX4P78413 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.62■■□□□ 1.21
IRX4P78413 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
IRX4P78413 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.62■■□□□ 1.21
IRX4P78413 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
IRX4P78413 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
IRX4P78413 EP400NL-214ENST00000641289 2402 ntBASIC22.61■■□□□ 1.21
IRX4P78413 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
IRX4P78413 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.61■■□□□ 1.21
IRX4P78413 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
IRX4P78413 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
IRX4P78413 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.61■■□□□ 1.21
IRX4P78413 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
IRX4P78413 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.61■■□□□ 1.21
IRX4P78413 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.61■■□□□ 1.21
IRX4P78413 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
IRX4P78413 AC233992.3-201ENST00000607491 485 ntBASIC22.61■■□□□ 1.21
IRX4P78413 AC136469.2-201ENST00000623944 1028 ntBASIC22.61■■□□□ 1.21
IRX4P78413 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.61■■□□□ 1.21
IRX4P78413 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.6■■□□□ 1.21
IRX4P78413 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.6■■□□□ 1.21
IRX4P78413 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
IRX4P78413 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms