Protein–RNA interactions for Protein: P62979

RPS27A, Ubiquitin-40S ribosomal protein S27a, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27AP62979 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
RPS27AP62979 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RPS27AP62979 SNX5-217ENST00000606557 1087 ntBASIC18.88■□□□□ 0.61
RPS27AP62979 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RPS27AP62979 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS27AP62979 C11orf96-202ENST00000528572 1834 ntBASIC18.88■□□□□ 0.61
RPS27AP62979 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS27AP62979 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS27AP62979 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RPS27AP62979 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS27AP62979 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS27AP62979 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
RPS27AP62979 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPS27AP62979 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPS27AP62979 TSPY13P-201ENST00000338964 914 ntBASIC18.87■□□□□ 0.61
RPS27AP62979 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
RPS27AP62979 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPS27AP62979 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RPS27AP62979 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RPS27AP62979 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.87■□□□□ 0.61
RPS27AP62979 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.87■□□□□ 0.61
RPS27AP62979 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RPS27AP62979 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RPS27AP62979 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RPS27AP62979 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
RPS27AP62979 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.87■□□□□ 0.61
RPS27AP62979 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RPS27AP62979 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS27AP62979 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.86■□□□□ 0.61
RPS27AP62979 AC080038.3-201ENST00000623346 1952 ntBASIC18.86■□□□□ 0.61
RPS27AP62979 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS27AP62979 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS27AP62979 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS27AP62979 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS27AP62979 AC087742.1-201ENST00000575880 1738 ntBASIC18.86■□□□□ 0.61
RPS27AP62979 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RPS27AP62979 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.86■□□□□ 0.61
RPS27AP62979 MIR4508-201ENST00000584178 70 ntBASIC18.86■□□□□ 0.61
RPS27AP62979 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS27AP62979 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RPS27AP62979 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPS27AP62979 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
RPS27AP62979 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS27AP62979 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RPS27AP62979 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS27AP62979 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS27AP62979 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.85■□□□□ 0.61
RPS27AP62979 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS27AP62979 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS27AP62979 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.85■□□□□ 0.61
RPS27AP62979 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.85■□□□□ 0.61
RPS27AP62979 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS27AP62979 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RPS27AP62979 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.85■□□□□ 0.61
RPS27AP62979 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.85■□□□□ 0.61
RPS27AP62979 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS27AP62979 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RPS27AP62979 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RPS27AP62979 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RPS27AP62979 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS27AP62979 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RPS27AP62979 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RPS27AP62979 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RPS27AP62979 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPS27AP62979 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPS27AP62979 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RPS27AP62979 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
RPS27AP62979 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPS27AP62979 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPS27AP62979 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPS27AP62979 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPS27AP62979 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RPS27AP62979 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.83■□□□□ 0.6
RPS27AP62979 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RPS27AP62979 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.82■□□□□ 0.6
RPS27AP62979 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS27AP62979 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS27AP62979 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RPS27AP62979 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RPS27AP62979 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS27AP62979 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS27AP62979 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.82■□□□□ 0.6
RPS27AP62979 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.82■□□□□ 0.6
RPS27AP62979 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.82■□□□□ 0.6
RPS27AP62979 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.82■□□□□ 0.6
RPS27AP62979 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS27AP62979 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RPS27AP62979 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.82■□□□□ 0.6
RPS27AP62979 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS27AP62979 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RPS27AP62979 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPS27AP62979 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RPS27AP62979 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS27AP62979 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.81■□□□□ 0.6
RPS27AP62979 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.81■□□□□ 0.6
RPS27AP62979 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS27AP62979 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPS27AP62979 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.81■□□□□ 0.6
RPS27AP62979 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPS27AP62979 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms