Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.23■□□□□ 0.99
CLDN6P56747 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.23■□□□□ 0.99
CLDN6P56747 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN6P56747 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN6P56747 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.23■□□□□ 0.99
CLDN6P56747 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.23■□□□□ 0.99
CLDN6P56747 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.23■□□□□ 0.99
CLDN6P56747 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN6P56747 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN6P56747 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.22■□□□□ 0.99
CLDN6P56747 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN6P56747 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN6P56747 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN6P56747 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN6P56747 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.22■□□□□ 0.99
CLDN6P56747 MIR663A-201ENST00000385250 93 ntBASIC21.22■□□□□ 0.99
CLDN6P56747 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN6P56747 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.22■□□□□ 0.99
CLDN6P56747 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.22■□□□□ 0.99
CLDN6P56747 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN6P56747 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.22■□□□□ 0.99
CLDN6P56747 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN6P56747 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.22■□□□□ 0.99
CLDN6P56747 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN6P56747 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.21■□□□□ 0.99
CLDN6P56747 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN6P56747 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.21■□□□□ 0.99
CLDN6P56747 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CLDN6P56747 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CLDN6P56747 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN6P56747 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CLDN6P56747 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN6P56747 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
CLDN6P56747 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN6P56747 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN6P56747 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN6P56747 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.2■□□□□ 0.98
CLDN6P56747 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN6P56747 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN6P56747 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.2■□□□□ 0.98
CLDN6P56747 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CLDN6P56747 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN6P56747 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN6P56747 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
CLDN6P56747 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN6P56747 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN6P56747 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN6P56747 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN6P56747 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN6P56747 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN6P56747 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.19■□□□□ 0.98
CLDN6P56747 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
CLDN6P56747 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.19■□□□□ 0.98
CLDN6P56747 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CLDN6P56747 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN6P56747 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CLDN6P56747 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN6P56747 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN6P56747 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN6P56747 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN6P56747 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN6P56747 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN6P56747 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN6P56747 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.18■□□□□ 0.98
CLDN6P56747 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN6P56747 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN6P56747 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CLDN6P56747 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN6P56747 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CLDN6P56747 NCF1B-203ENST00000435988 1254 ntBASIC21.17■□□□□ 0.98
CLDN6P56747 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.17■□□□□ 0.98
CLDN6P56747 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN6P56747 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN6P56747 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN6P56747 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CLDN6P56747 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN6P56747 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN6P56747 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN6P56747 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.16■□□□□ 0.98
CLDN6P56747 AC004687.1-201ENST00000579003 1625 ntBASIC21.16■□□□□ 0.98
CLDN6P56747 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN6P56747 BX005040.4-201ENST00000637145 1518 ntBASIC21.16■□□□□ 0.98
CLDN6P56747 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN6P56747 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CLDN6P56747 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN6P56747 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN6P56747 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN6P56747 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN6P56747 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.15■□□□□ 0.98
CLDN6P56747 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.15■□□□□ 0.98
CLDN6P56747 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.15■□□□□ 0.98
CLDN6P56747 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN6P56747 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN6P56747 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN6P56747 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CLDN6P56747 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN6P56747 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN6P56747 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN6P56747 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN6P56747 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms