Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CAV3P56539 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CAV3P56539 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAV3P56539 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAV3P56539 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAV3P56539 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAV3P56539 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAV3P56539 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAV3P56539 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAV3P56539 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAV3P56539 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CAV3P56539 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CAV3P56539 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CAV3P56539 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.53■□□□□ 0.72
CAV3P56539 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAV3P56539 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAV3P56539 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAV3P56539 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.52■□□□□ 0.72
CAV3P56539 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CAV3P56539 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CAV3P56539 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CAV3P56539 AC131274.2-201ENST00000580697 1507 ntBASIC19.52■□□□□ 0.72
CAV3P56539 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CAV3P56539 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CAV3P56539 YBX1P4-201ENST00000392794 808 ntBASIC19.52■□□□□ 0.72
CAV3P56539 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.52■□□□□ 0.72
CAV3P56539 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CAV3P56539 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CAV3P56539 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
CAV3P56539 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CAV3P56539 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CAV3P56539 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAV3P56539 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.51■□□□□ 0.71
CAV3P56539 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAV3P56539 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAV3P56539 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAV3P56539 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CAV3P56539 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAV3P56539 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAV3P56539 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CAV3P56539 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.51■□□□□ 0.71
CAV3P56539 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.51■□□□□ 0.71
CAV3P56539 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAV3P56539 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.51■□□□□ 0.71
CAV3P56539 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.51■□□□□ 0.71
CAV3P56539 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CAV3P56539 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.51■□□□□ 0.71
CAV3P56539 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAV3P56539 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CAV3P56539 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CAV3P56539 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CAV3P56539 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CAV3P56539 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CAV3P56539 AC103834.1-201ENST00000520383 144 ntBASIC19.5■□□□□ 0.71
CAV3P56539 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CAV3P56539 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CAV3P56539 AC005229.4-201ENST00000610085 2198 ntBASIC19.5■□□□□ 0.71
CAV3P56539 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.5■□□□□ 0.71
CAV3P56539 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.5■□□□□ 0.71
CAV3P56539 FAM99A-202ENST00000538190 1989 ntBASIC19.5■□□□□ 0.71
CAV3P56539 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CAV3P56539 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CAV3P56539 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CAV3P56539 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.49■□□□□ 0.71
CAV3P56539 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CAV3P56539 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CAV3P56539 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CAV3P56539 AC011551.1-201ENST00000614101 683 ntBASIC19.49■□□□□ 0.71
CAV3P56539 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.49■□□□□ 0.71
CAV3P56539 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CAV3P56539 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CAV3P56539 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CAV3P56539 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CAV3P56539 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CAV3P56539 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CAV3P56539 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CAV3P56539 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CAV3P56539 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CAV3P56539 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CAV3P56539 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.48■□□□□ 0.71
CAV3P56539 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CAV3P56539 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.48■□□□□ 0.71
CAV3P56539 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.48■□□□□ 0.71
CAV3P56539 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CAV3P56539 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.48■□□□□ 0.71
CAV3P56539 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CAV3P56539 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAV3P56539 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAV3P56539 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAV3P56539 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CAV3P56539 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CAV3P56539 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.47■□□□□ 0.71
CAV3P56539 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.47■□□□□ 0.71
CAV3P56539 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.47■□□□□ 0.71
CAV3P56539 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
CAV3P56539 KRT8P33-201ENST00000508125 1423 ntBASIC19.47■□□□□ 0.71
CAV3P56539 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CAV3P56539 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CAV3P56539 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CAV3P56539 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms