Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TTC3P53804 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TTC3P53804 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.9■■□□□ 1.42
TTC3P53804 BX005040.4-201ENST00000637145 1518 ntBASIC23.9■■□□□ 1.42
TTC3P53804 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
TTC3P53804 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.9■■□□□ 1.42
TTC3P53804 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
TTC3P53804 CDCA4P2-201ENST00000441182 718 ntBASIC23.89■■□□□ 1.42
TTC3P53804 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.89■■□□□ 1.42
TTC3P53804 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
TTC3P53804 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
TTC3P53804 AC004854.2-201ENST00000608450 1441 ntBASIC23.89■■□□□ 1.42
TTC3P53804 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TTC3P53804 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TTC3P53804 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TTC3P53804 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.89■■□□□ 1.41
TTC3P53804 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.89■■□□□ 1.41
TTC3P53804 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.89■■□□□ 1.41
TTC3P53804 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.88■■□□□ 1.41
TTC3P53804 AC068587.7-201ENST00000641602 218 ntBASIC23.88■■□□□ 1.41
TTC3P53804 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TTC3P53804 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.88■■□□□ 1.41
TTC3P53804 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TTC3P53804 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.88■■□□□ 1.41
TTC3P53804 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.88■■□□□ 1.41
TTC3P53804 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.88■■□□□ 1.41
TTC3P53804 AC087239.1-201ENST00000622671 572 ntBASIC23.88■■□□□ 1.41
TTC3P53804 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
TTC3P53804 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TTC3P53804 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TTC3P53804 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TTC3P53804 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TTC3P53804 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.87■■□□□ 1.41
TTC3P53804 HLA-L-209ENST00000420110 1011 ntBASIC23.87■■□□□ 1.41
TTC3P53804 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.87■■□□□ 1.41
TTC3P53804 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
TTC3P53804 AC073111.5-205ENST00000641717 521 ntBASIC23.87■■□□□ 1.41
TTC3P53804 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.87■■□□□ 1.41
TTC3P53804 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
TTC3P53804 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.86■■□□□ 1.41
TTC3P53804 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
TTC3P53804 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TTC3P53804 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.86■■□□□ 1.41
TTC3P53804 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
TTC3P53804 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.86■■□□□ 1.41
TTC3P53804 LINC01124-201ENST00000409786 2117 ntBASIC23.86■■□□□ 1.41
TTC3P53804 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.86■■□□□ 1.41
TTC3P53804 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.86■■□□□ 1.41
TTC3P53804 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TTC3P53804 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TTC3P53804 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TTC3P53804 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.85■■□□□ 1.41
TTC3P53804 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.85■■□□□ 1.41
TTC3P53804 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TTC3P53804 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.85■■□□□ 1.41
TTC3P53804 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.85■■□□□ 1.41
TTC3P53804 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.85■■□□□ 1.41
TTC3P53804 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.85■■□□□ 1.41
TTC3P53804 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.85■■□□□ 1.41
TTC3P53804 AC026185.1-201ENST00000445748 174 ntBASIC23.84■■□□□ 1.41
TTC3P53804 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TTC3P53804 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TTC3P53804 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TTC3P53804 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.84■■□□□ 1.41
TTC3P53804 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TTC3P53804 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TTC3P53804 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.84■■□□□ 1.41
TTC3P53804 KRT19P1-201ENST00000405746 1186 ntBASIC23.84■■□□□ 1.41
TTC3P53804 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
TTC3P53804 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
TTC3P53804 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
TTC3P53804 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TTC3P53804 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.84■■□□□ 1.41
TTC3P53804 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.83■■□□□ 1.41
TTC3P53804 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TTC3P53804 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.83■■□□□ 1.41
TTC3P53804 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.83■■□□□ 1.41
TTC3P53804 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
TTC3P53804 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.83■■□□□ 1.4
TTC3P53804 AC080038.1-201ENST00000611274 1154 ntBASIC23.83■■□□□ 1.4
TTC3P53804 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
TTC3P53804 AC004812.2-201ENST00000611079 2094 ntBASIC23.82■■□□□ 1.4
TTC3P53804 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.82■■□□□ 1.4
TTC3P53804 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.82■■□□□ 1.4
TTC3P53804 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TTC3P53804 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.82■■□□□ 1.4
TTC3P53804 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.82■■□□□ 1.4
TTC3P53804 SMUG1P1-201ENST00000590640 811 ntBASIC23.82■■□□□ 1.4
TTC3P53804 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
TTC3P53804 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TTC3P53804 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.81■■□□□ 1.4
TTC3P53804 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.81■■□□□ 1.4
TTC3P53804 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TTC3P53804 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TTC3P53804 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TTC3P53804 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TTC3P53804 ABCB10P4-201ENST00000566803 2184 ntBASIC23.81■■□□□ 1.4
TTC3P53804 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.81■■□□□ 1.4
TTC3P53804 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.81■■□□□ 1.4
TTC3P53804 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms