Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HMGA2P52926 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HMGA2P52926 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.12■□□□□ 0.81
HMGA2P52926 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HMGA2P52926 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HMGA2P52926 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.12■□□□□ 0.81
HMGA2P52926 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
HMGA2P52926 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
HMGA2P52926 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.12■□□□□ 0.81
HMGA2P52926 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
HMGA2P52926 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HMGA2P52926 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HMGA2P52926 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
HMGA2P52926 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HMGA2P52926 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HMGA2P52926 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
HMGA2P52926 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.11■□□□□ 0.81
HMGA2P52926 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HMGA2P52926 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HMGA2P52926 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.11■□□□□ 0.81
HMGA2P52926 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGA2P52926 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGA2P52926 AC103724.3-201ENST00000564481 992 ntBASIC20.1■□□□□ 0.81
HMGA2P52926 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.1■□□□□ 0.81
HMGA2P52926 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGA2P52926 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGA2P52926 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.1■□□□□ 0.81
HMGA2P52926 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGA2P52926 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGA2P52926 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
HMGA2P52926 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGA2P52926 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGA2P52926 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGA2P52926 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGA2P52926 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
HMGA2P52926 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.09■□□□□ 0.81
HMGA2P52926 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.09■□□□□ 0.81
HMGA2P52926 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.09■□□□□ 0.81
HMGA2P52926 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.09■□□□□ 0.81
HMGA2P52926 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HMGA2P52926 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGA2P52926 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGA2P52926 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.09■□□□□ 0.81
HMGA2P52926 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.09■□□□□ 0.81
HMGA2P52926 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.09■□□□□ 0.81
HMGA2P52926 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.09■□□□□ 0.81
HMGA2P52926 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.09■□□□□ 0.81
HMGA2P52926 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.09■□□□□ 0.81
HMGA2P52926 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.08■□□□□ 0.81
HMGA2P52926 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HMGA2P52926 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HMGA2P52926 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.08■□□□□ 0.81
HMGA2P52926 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.08■□□□□ 0.81
HMGA2P52926 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
HMGA2P52926 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
HMGA2P52926 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HMGA2P52926 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HMGA2P52926 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HMGA2P52926 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
HMGA2P52926 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HMGA2P52926 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HMGA2P52926 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HMGA2P52926 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.07■□□□□ 0.8
HMGA2P52926 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
HMGA2P52926 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HMGA2P52926 AC244015.2-201ENST00000616358 1861 ntBASIC20.07■□□□□ 0.8
HMGA2P52926 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HMGA2P52926 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HMGA2P52926 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HMGA2P52926 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HMGA2P52926 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.07■□□□□ 0.8
HMGA2P52926 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.07■□□□□ 0.8
HMGA2P52926 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
HMGA2P52926 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HMGA2P52926 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HMGA2P52926 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HMGA2P52926 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.07■□□□□ 0.8
HMGA2P52926 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.06■□□□□ 0.8
HMGA2P52926 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGA2P52926 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGA2P52926 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HMGA2P52926 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGA2P52926 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGA2P52926 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGA2P52926 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.06■□□□□ 0.8
HMGA2P52926 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGA2P52926 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGA2P52926 AC021242.3-201ENST00000607598 1377 ntBASIC20.06■□□□□ 0.8
HMGA2P52926 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGA2P52926 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGA2P52926 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.05■□□□□ 0.8
HMGA2P52926 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGA2P52926 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGA2P52926 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGA2P52926 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
HMGA2P52926 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGA2P52926 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.05■□□□□ 0.8
HMGA2P52926 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.05■□□□□ 0.8
HMGA2P52926 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.05■□□□□ 0.8
HMGA2P52926 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms