Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.86■■□□□ 1.41
CDR1P51861 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CDR1P51861 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.86■■□□□ 1.41
CDR1P51861 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.86■■□□□ 1.41
CDR1P51861 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.86■■□□□ 1.41
CDR1P51861 AL136967.2-201ENST00000623968 743 ntBASIC23.86■■□□□ 1.41
CDR1P51861 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDR1P51861 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.86■■□□□ 1.41
CDR1P51861 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CDR1P51861 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDR1P51861 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
CDR1P51861 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDR1P51861 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDR1P51861 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDR1P51861 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDR1P51861 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDR1P51861 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDR1P51861 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDR1P51861 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDR1P51861 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDR1P51861 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDR1P51861 AP001330.3-201ENST00000520123 633 ntBASIC23.85■■□□□ 1.41
CDR1P51861 AL355001.2-201ENST00000620617 1191 ntBASIC23.85■■□□□ 1.41
CDR1P51861 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
CDR1P51861 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDR1P51861 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDR1P51861 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.85■■□□□ 1.41
CDR1P51861 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDR1P51861 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDR1P51861 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDR1P51861 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDR1P51861 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDR1P51861 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CDR1P51861 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDR1P51861 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDR1P51861 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.84■■□□□ 1.41
CDR1P51861 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.84■■□□□ 1.41
CDR1P51861 DUX4L19-201ENST00000557448 1267 ntBASIC23.84■■□□□ 1.41
CDR1P51861 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CDR1P51861 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
CDR1P51861 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CDR1P51861 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
CDR1P51861 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.84■■□□□ 1.41
CDR1P51861 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDR1P51861 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDR1P51861 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDR1P51861 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDR1P51861 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.83■■□□□ 1.41
CDR1P51861 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.83■■□□□ 1.41
CDR1P51861 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDR1P51861 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
CDR1P51861 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CDR1P51861 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.82■■□□□ 1.4
CDR1P51861 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDR1P51861 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDR1P51861 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDR1P51861 EDA-201ENST00000338901 1233 ntBASIC23.82■■□□□ 1.4
CDR1P51861 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.82■■□□□ 1.4
CDR1P51861 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.82■■□□□ 1.4
CDR1P51861 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDR1P51861 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
CDR1P51861 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDR1P51861 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDR1P51861 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.81■■□□□ 1.4
CDR1P51861 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDR1P51861 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.81■■□□□ 1.4
CDR1P51861 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDR1P51861 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDR1P51861 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
CDR1P51861 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDR1P51861 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDR1P51861 AC105265.2-201ENST00000467189 838 ntBASIC23.81■■□□□ 1.4
CDR1P51861 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.81■■□□□ 1.4
CDR1P51861 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.81■■□□□ 1.4
CDR1P51861 AC241377.3-202ENST00000626088 1088 ntBASIC23.81■■□□□ 1.4
CDR1P51861 AC241585.3-202ENST00000628937 1088 ntBASIC23.81■■□□□ 1.4
CDR1P51861 AC245100.8-202ENST00000629247 1058 ntBASIC23.81■■□□□ 1.4
CDR1P51861 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDR1P51861 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDR1P51861 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.81■■□□□ 1.4
CDR1P51861 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CDR1P51861 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
CDR1P51861 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
CDR1P51861 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.81■■□□□ 1.4
CDR1P51861 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CDR1P51861 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDR1P51861 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDR1P51861 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.8■■□□□ 1.4
CDR1P51861 AC092171.4-201ENST00000609130 632 ntBASIC23.8■■□□□ 1.4
CDR1P51861 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.8■■□□□ 1.4
CDR1P51861 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CDR1P51861 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDR1P51861 AL117328.2-201ENST00000624617 1940 ntBASIC23.8■■□□□ 1.4
CDR1P51861 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDR1P51861 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.79■■□□□ 1.4
CDR1P51861 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CDR1P51861 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDR1P51861 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CDR1P51861 MIR939-201ENST00000401314 82 ntBASIC23.79■■□□□ 1.4
CDR1P51861 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms