Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
CLCN4P51793 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLCN4P51793 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CLCN4P51793 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CLCN4P51793 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CLCN4P51793 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CLCN4P51793 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.3■■□□□ 1.32
CLCN4P51793 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.3■■□□□ 1.32
CLCN4P51793 RAP2CP1-201ENST00000605103 478 ntBASIC23.3■■□□□ 1.32
CLCN4P51793 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.3■■□□□ 1.32
CLCN4P51793 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CLCN4P51793 AP004607.4-201ENST00000530158 1459 ntBASIC23.3■■□□□ 1.32
CLCN4P51793 AC004687.1-201ENST00000579003 1625 ntBASIC23.3■■□□□ 1.32
CLCN4P51793 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CLCN4P51793 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.29■■□□□ 1.32
CLCN4P51793 AC016769.1-201ENST00000409132 1010 ntBASIC23.29■■□□□ 1.32
CLCN4P51793 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
CLCN4P51793 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CLCN4P51793 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLCN4P51793 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.29■■□□□ 1.32
CLCN4P51793 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.29■■□□□ 1.32
CLCN4P51793 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLCN4P51793 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLCN4P51793 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLCN4P51793 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLCN4P51793 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
CLCN4P51793 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
CLCN4P51793 BX005040.4-201ENST00000637145 1518 ntBASIC23.28■■□□□ 1.32
CLCN4P51793 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLCN4P51793 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CLCN4P51793 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.28■■□□□ 1.32
CLCN4P51793 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.28■■□□□ 1.32
CLCN4P51793 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.28■■□□□ 1.32
CLCN4P51793 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.28■■□□□ 1.32
CLCN4P51793 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CLCN4P51793 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
CLCN4P51793 AC079630.1-202ENST00000618127 1840 ntBASIC23.27■■□□□ 1.32
CLCN4P51793 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.27■■□□□ 1.32
CLCN4P51793 CDCA4P2-201ENST00000441182 718 ntBASIC23.27■■□□□ 1.32
CLCN4P51793 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.27■■□□□ 1.32
CLCN4P51793 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.27■■□□□ 1.32
CLCN4P51793 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.27■■□□□ 1.32
CLCN4P51793 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.27■■□□□ 1.32
CLCN4P51793 AC068587.7-201ENST00000641602 218 ntBASIC23.27■■□□□ 1.32
CLCN4P51793 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CLCN4P51793 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.27■■□□□ 1.32
CLCN4P51793 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CLCN4P51793 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.27■■□□□ 1.32
CLCN4P51793 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.27■■□□□ 1.31
CLCN4P51793 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLCN4P51793 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.26■■□□□ 1.31
CLCN4P51793 AC004854.2-201ENST00000608450 1441 ntBASIC23.26■■□□□ 1.31
CLCN4P51793 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLCN4P51793 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.26■■□□□ 1.31
CLCN4P51793 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLCN4P51793 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.26■■□□□ 1.31
CLCN4P51793 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CLCN4P51793 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.26■■□□□ 1.31
CLCN4P51793 AC073111.5-205ENST00000641717 521 ntBASIC23.26■■□□□ 1.31
CLCN4P51793 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLCN4P51793 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.26■■□□□ 1.31
CLCN4P51793 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.26■■□□□ 1.31
CLCN4P51793 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.26■■□□□ 1.31
CLCN4P51793 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
CLCN4P51793 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLCN4P51793 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLCN4P51793 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLCN4P51793 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.25■■□□□ 1.31
CLCN4P51793 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.25■■□□□ 1.31
CLCN4P51793 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLCN4P51793 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CLCN4P51793 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLCN4P51793 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CLCN4P51793 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLCN4P51793 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLCN4P51793 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
CLCN4P51793 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
CLCN4P51793 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.24■■□□□ 1.31
CLCN4P51793 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLCN4P51793 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.24■■□□□ 1.31
CLCN4P51793 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.24■■□□□ 1.31
CLCN4P51793 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
CLCN4P51793 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.23■■□□□ 1.31
CLCN4P51793 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.23■■□□□ 1.31
CLCN4P51793 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CLCN4P51793 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLCN4P51793 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLCN4P51793 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLCN4P51793 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CLCN4P51793 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CLCN4P51793 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CLCN4P51793 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLCN4P51793 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.23■■□□□ 1.31
CLCN4P51793 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CLCN4P51793 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLCN4P51793 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLCN4P51793 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLCN4P51793 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLCN4P51793 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLCN4P51793 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms