Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
THBS3P49746 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THBS3P49746 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.09■□□□□ 0.49
THBS3P49746 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
THBS3P49746 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
THBS3P49746 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
THBS3P49746 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.09■□□□□ 0.49
THBS3P49746 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
THBS3P49746 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THBS3P49746 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.09■□□□□ 0.49
THBS3P49746 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
THBS3P49746 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
THBS3P49746 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
THBS3P49746 AC008406.3-201ENST00000620001 1374 ntBASIC18.09■□□□□ 0.49
THBS3P49746 FP325331.1-202ENST00000623531 1380 ntBASIC18.09■□□□□ 0.49
THBS3P49746 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
THBS3P49746 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
THBS3P49746 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
THBS3P49746 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
THBS3P49746 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.09■□□□□ 0.49
THBS3P49746 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THBS3P49746 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THBS3P49746 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
THBS3P49746 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
THBS3P49746 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THBS3P49746 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THBS3P49746 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THBS3P49746 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
THBS3P49746 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
THBS3P49746 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
THBS3P49746 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
THBS3P49746 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
THBS3P49746 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.08■□□□□ 0.49
THBS3P49746 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
THBS3P49746 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.08■□□□□ 0.48
THBS3P49746 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.08■□□□□ 0.48
THBS3P49746 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.08■□□□□ 0.48
THBS3P49746 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.08■□□□□ 0.48
THBS3P49746 MTDHP2-201ENST00000601468 714 ntBASIC18.08■□□□□ 0.48
THBS3P49746 LINC01529-204ENST00000636474 1715 ntBASIC18.08■□□□□ 0.48
THBS3P49746 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
THBS3P49746 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
THBS3P49746 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
THBS3P49746 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
THBS3P49746 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.07■□□□□ 0.48
THBS3P49746 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.07■□□□□ 0.48
THBS3P49746 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
THBS3P49746 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
THBS3P49746 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.07■□□□□ 0.48
THBS3P49746 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.07■□□□□ 0.48
THBS3P49746 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.07■□□□□ 0.48
THBS3P49746 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.07■□□□□ 0.48
THBS3P49746 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
THBS3P49746 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
THBS3P49746 ECEL1P1-201ENST00000373592 1742 ntBASIC18.06■□□□□ 0.48
THBS3P49746 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
THBS3P49746 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
THBS3P49746 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
THBS3P49746 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
THBS3P49746 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.06■□□□□ 0.48
THBS3P49746 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
THBS3P49746 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
THBS3P49746 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
THBS3P49746 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
THBS3P49746 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
THBS3P49746 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
THBS3P49746 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.06■□□□□ 0.48
THBS3P49746 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
THBS3P49746 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THBS3P49746 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
THBS3P49746 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
THBS3P49746 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THBS3P49746 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THBS3P49746 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
THBS3P49746 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
THBS3P49746 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THBS3P49746 AC127496.7-201ENST00000625110 1798 ntBASIC18.05■□□□□ 0.48
THBS3P49746 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
THBS3P49746 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THBS3P49746 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THBS3P49746 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THBS3P49746 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THBS3P49746 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
THBS3P49746 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THBS3P49746 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THBS3P49746 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.04■□□□□ 0.48
THBS3P49746 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THBS3P49746 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
THBS3P49746 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
THBS3P49746 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.04■□□□□ 0.48
THBS3P49746 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
THBS3P49746 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THBS3P49746 AC010997.5-201ENST00000609182 354 ntBASIC18.04■□□□□ 0.48
THBS3P49746 AC242852.2-201ENST00000615738 1807 ntBASIC18.04■□□□□ 0.48
THBS3P49746 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
THBS3P49746 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
THBS3P49746 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THBS3P49746 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
THBS3P49746 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.04■□□□□ 0.48
THBS3P49746 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms