Protein–RNA interactions for Protein: P48960

CD97, CD97 antigen, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD97P48960 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.91■□□□□ 0.94
CD97P48960 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CD97P48960 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.9■□□□□ 0.94
CD97P48960 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CD97P48960 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD97P48960 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.9■□□□□ 0.94
CD97P48960 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.9■□□□□ 0.94
CD97P48960 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.9■□□□□ 0.94
CD97P48960 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD97P48960 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD97P48960 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD97P48960 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD97P48960 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.9■□□□□ 0.94
CD97P48960 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CD97P48960 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CD97P48960 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.9■□□□□ 0.94
CD97P48960 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.9■□□□□ 0.94
CD97P48960 AC022517.1-201ENST00000592429 346 ntBASIC20.9■□□□□ 0.94
CD97P48960 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CD97P48960 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.9■□□□□ 0.94
CD97P48960 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD97P48960 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CD97P48960 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CD97P48960 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD97P48960 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD97P48960 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.9■□□□□ 0.94
CD97P48960 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD97P48960 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CD97P48960 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.89■□□□□ 0.94
CD97P48960 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CD97P48960 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CD97P48960 AC034268.1-201ENST00000441047 882 ntBASIC20.89■□□□□ 0.93
CD97P48960 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.89■□□□□ 0.93
CD97P48960 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CD97P48960 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CD97P48960 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CD97P48960 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CD97P48960 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.89■□□□□ 0.93
CD97P48960 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.89■□□□□ 0.93
CD97P48960 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CD97P48960 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD97P48960 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CD97P48960 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CD97P48960 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD97P48960 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD97P48960 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.88■□□□□ 0.93
CD97P48960 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.88■□□□□ 0.93
CD97P48960 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CD97P48960 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.88■□□□□ 0.93
CD97P48960 IKBKGP1-201ENST00000612193 1073 ntBASIC20.88■□□□□ 0.93
CD97P48960 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
CD97P48960 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD97P48960 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD97P48960 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD97P48960 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD97P48960 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.87■□□□□ 0.93
CD97P48960 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CD97P48960 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CD97P48960 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CD97P48960 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CD97P48960 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CD97P48960 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.87■□□□□ 0.93
CD97P48960 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CD97P48960 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.87■□□□□ 0.93
CD97P48960 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CD97P48960 AL137784.2-201ENST00000607332 1000 ntBASIC20.87■□□□□ 0.93
CD97P48960 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CD97P48960 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CD97P48960 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CD97P48960 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
CD97P48960 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD97P48960 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CD97P48960 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD97P48960 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD97P48960 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.86■□□□□ 0.93
CD97P48960 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CD97P48960 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD97P48960 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD97P48960 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.86■□□□□ 0.93
CD97P48960 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CD97P48960 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.86■□□□□ 0.93
CD97P48960 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.86■□□□□ 0.93
CD97P48960 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD97P48960 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD97P48960 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CD97P48960 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD97P48960 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD97P48960 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD97P48960 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD97P48960 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD97P48960 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD97P48960 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.85■□□□□ 0.93
CD97P48960 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CD97P48960 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.85■□□□□ 0.93
CD97P48960 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.85■□□□□ 0.93
CD97P48960 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.85■□□□□ 0.93
CD97P48960 AC136469.2-201ENST00000623944 1028 ntBASIC20.85■□□□□ 0.93
CD97P48960 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD97P48960 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
CD97P48960 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms