Protein–RNA interactions for Protein: P46094

XCR1, Chemokine XC receptor 1, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1P46094 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
XCR1P46094 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
XCR1P46094 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
XCR1P46094 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
XCR1P46094 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
XCR1P46094 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.97■□□□□ 0.95
XCR1P46094 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.97■□□□□ 0.95
XCR1P46094 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.97■□□□□ 0.95
XCR1P46094 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.97■□□□□ 0.95
XCR1P46094 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
XCR1P46094 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
XCR1P46094 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.97■□□□□ 0.95
XCR1P46094 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
XCR1P46094 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
XCR1P46094 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
XCR1P46094 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
XCR1P46094 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
XCR1P46094 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
XCR1P46094 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
XCR1P46094 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
XCR1P46094 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
XCR1P46094 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
XCR1P46094 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.96■□□□□ 0.95
XCR1P46094 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.96■□□□□ 0.95
XCR1P46094 EP400NL-214ENST00000641289 2402 ntBASIC20.96■□□□□ 0.95
XCR1P46094 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
XCR1P46094 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
XCR1P46094 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
XCR1P46094 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.96■□□□□ 0.95
XCR1P46094 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
XCR1P46094 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
XCR1P46094 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.95■□□□□ 0.94
XCR1P46094 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
XCR1P46094 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
XCR1P46094 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
XCR1P46094 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.95■□□□□ 0.94
XCR1P46094 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.95■□□□□ 0.94
XCR1P46094 AF213884.3-201ENST00000563833 479 ntBASIC20.95■□□□□ 0.94
XCR1P46094 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.95■□□□□ 0.94
XCR1P46094 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.95■□□□□ 0.94
XCR1P46094 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
XCR1P46094 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
XCR1P46094 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
XCR1P46094 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
XCR1P46094 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
XCR1P46094 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
XCR1P46094 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
XCR1P46094 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
XCR1P46094 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
XCR1P46094 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.94■□□□□ 0.94
XCR1P46094 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.94■□□□□ 0.94
XCR1P46094 SUDS3P1-201ENST00000505831 966 ntBASIC20.94■□□□□ 0.94
XCR1P46094 AP001330.3-201ENST00000520123 633 ntBASIC20.94■□□□□ 0.94
XCR1P46094 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
XCR1P46094 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
XCR1P46094 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
XCR1P46094 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
XCR1P46094 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.94■□□□□ 0.94
XCR1P46094 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
XCR1P46094 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
XCR1P46094 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.93■□□□□ 0.94
XCR1P46094 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
XCR1P46094 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
XCR1P46094 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
XCR1P46094 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
XCR1P46094 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
XCR1P46094 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.93■□□□□ 0.94
XCR1P46094 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
XCR1P46094 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
XCR1P46094 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
XCR1P46094 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.92■□□□□ 0.94
XCR1P46094 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
XCR1P46094 CLDN5-201ENST00000403084 2357 ntBASIC20.92■□□□□ 0.94
XCR1P46094 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
XCR1P46094 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
XCR1P46094 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
XCR1P46094 MIR939-201ENST00000401314 82 ntBASIC20.92■□□□□ 0.94
XCR1P46094 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.92■□□□□ 0.94
XCR1P46094 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
XCR1P46094 AC008764.7-201ENST00000593779 1081 ntBASIC20.92■□□□□ 0.94
XCR1P46094 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.92■□□□□ 0.94
XCR1P46094 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
XCR1P46094 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
XCR1P46094 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
XCR1P46094 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
XCR1P46094 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
XCR1P46094 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
XCR1P46094 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
XCR1P46094 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
XCR1P46094 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
XCR1P46094 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
XCR1P46094 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.91■□□□□ 0.94
XCR1P46094 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.91■□□□□ 0.94
XCR1P46094 AL136967.2-201ENST00000623968 743 ntBASIC20.91■□□□□ 0.94
XCR1P46094 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
XCR1P46094 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
XCR1P46094 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
XCR1P46094 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
XCR1P46094 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
XCR1P46094 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms