Protein–RNA interactions for Protein: P28329

CHAT, Choline O-acetyltransferase, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHATP28329 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHATP28329 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHATP28329 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHATP28329 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CHATP28329 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CHATP28329 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CHATP28329 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHATP28329 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHATP28329 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHATP28329 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHATP28329 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.69■□□□□ 0.58
CHATP28329 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.69■□□□□ 0.58
CHATP28329 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHATP28329 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.69■□□□□ 0.58
CHATP28329 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CHATP28329 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHATP28329 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHATP28329 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHATP28329 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHATP28329 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CHATP28329 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.69■□□□□ 0.58
CHATP28329 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHATP28329 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHATP28329 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CHATP28329 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHATP28329 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHATP28329 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHATP28329 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHATP28329 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.68■□□□□ 0.58
CHATP28329 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHATP28329 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHATP28329 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHATP28329 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHATP28329 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CHATP28329 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.68■□□□□ 0.58
CHATP28329 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.68■□□□□ 0.58
CHATP28329 MIR6722-201ENST00000617286 78 ntBASIC18.68■□□□□ 0.58
CHATP28329 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.68■□□□□ 0.58
CHATP28329 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHATP28329 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.68■□□□□ 0.58
CHATP28329 LINC01529-204ENST00000636474 1715 ntBASIC18.68■□□□□ 0.58
CHATP28329 AC005703.6-201ENST00000623265 1329 ntBASIC18.68■□□□□ 0.58
CHATP28329 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHATP28329 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHATP28329 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHATP28329 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHATP28329 C11orf96-202ENST00000528572 1834 ntBASIC18.67■□□□□ 0.58
CHATP28329 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHATP28329 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.67■□□□□ 0.58
CHATP28329 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CHATP28329 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CHATP28329 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHATP28329 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CHATP28329 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.67■□□□□ 0.58
CHATP28329 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.67■□□□□ 0.58
CHATP28329 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHATP28329 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHATP28329 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
CHATP28329 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHATP28329 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHATP28329 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.66■□□□□ 0.58
CHATP28329 AL031848.2-201ENST00000607670 837 ntBASIC18.66■□□□□ 0.58
CHATP28329 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHATP28329 FP325331.1-202ENST00000623531 1380 ntBASIC18.66■□□□□ 0.58
CHATP28329 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHATP28329 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.66■□□□□ 0.58
CHATP28329 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHATP28329 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHATP28329 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHATP28329 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHATP28329 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHATP28329 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHATP28329 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHATP28329 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHATP28329 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.65■□□□□ 0.58
CHATP28329 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.65■□□□□ 0.58
CHATP28329 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CHATP28329 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.65■□□□□ 0.58
CHATP28329 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.65■□□□□ 0.58
CHATP28329 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHATP28329 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CHATP28329 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CHATP28329 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CHATP28329 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.65■□□□□ 0.58
CHATP28329 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHATP28329 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHATP28329 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHATP28329 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHATP28329 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHATP28329 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.64■□□□□ 0.57
CHATP28329 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHATP28329 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHATP28329 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHATP28329 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHATP28329 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.64■□□□□ 0.57
CHATP28329 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHATP28329 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CHATP28329 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHATP28329 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.64■□□□□ 0.57
CHATP28329 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms