Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP24386 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP24386 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP24386 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP24386 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP24386 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP24386 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP24386 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP24386 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
CHMP24386 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.47■□□□□ 0.87
CHMP24386 SRD5A1P1-201ENST00000442297 786 ntBASIC20.47■□□□□ 0.87
CHMP24386 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CHMP24386 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP24386 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHMP24386 AC007375.3-201ENST00000600936 2314 ntBASIC20.47■□□□□ 0.87
CHMP24386 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP24386 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP24386 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.46■□□□□ 0.87
CHMP24386 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP24386 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP24386 AC079630.1-202ENST00000618127 1840 ntBASIC20.46■□□□□ 0.87
CHMP24386 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP24386 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CHMP24386 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.46■□□□□ 0.87
CHMP24386 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.46■□□□□ 0.87
CHMP24386 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHMP24386 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.46■□□□□ 0.87
CHMP24386 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.46■□□□□ 0.87
CHMP24386 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.46■□□□□ 0.87
CHMP24386 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.46■□□□□ 0.87
CHMP24386 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.46■□□□□ 0.87
CHMP24386 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.46■□□□□ 0.87
CHMP24386 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.46■□□□□ 0.87
CHMP24386 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CHMP24386 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP24386 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.45■□□□□ 0.86
CHMP24386 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP24386 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP24386 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP24386 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP24386 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP24386 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.45■□□□□ 0.86
CHMP24386 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP24386 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP24386 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CHMP24386 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.45■□□□□ 0.86
CHMP24386 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHMP24386 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.45■□□□□ 0.86
CHMP24386 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.44■□□□□ 0.86
CHMP24386 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
CHMP24386 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP24386 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP24386 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP24386 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CHMP24386 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.44■□□□□ 0.86
CHMP24386 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP24386 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.44■□□□□ 0.86
CHMP24386 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CHMP24386 AC009102.2-201ENST00000606772 1639 ntBASIC20.44■□□□□ 0.86
CHMP24386 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP24386 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
CHMP24386 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHMP24386 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.44■□□□□ 0.86
CHMP24386 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.44■□□□□ 0.86
CHMP24386 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP24386 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CHMP24386 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP24386 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP24386 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP24386 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.43■□□□□ 0.86
CHMP24386 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP24386 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP24386 AL139246.5-201ENST00000606645 996 ntBASIC20.43■□□□□ 0.86
CHMP24386 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CHMP24386 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.43■□□□□ 0.86
CHMP24386 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CHMP24386 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.43■□□□□ 0.86
CHMP24386 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP24386 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHMP24386 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP24386 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP24386 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP24386 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP24386 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.42■□□□□ 0.86
CHMP24386 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.42■□□□□ 0.86
CHMP24386 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP24386 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHMP24386 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.42■□□□□ 0.86
CHMP24386 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CHMP24386 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CHMP24386 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP24386 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
CHMP24386 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP24386 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.41■□□□□ 0.86
CHMP24386 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CHMP24386 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP24386 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHMP24386 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
CHMP24386 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.41■□□□□ 0.86
CHMP24386 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms