Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN3P20807 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.13■□□□□ 0.97
CAPN3P20807 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN3P20807 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.13■□□□□ 0.97
CAPN3P20807 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.13■□□□□ 0.97
CAPN3P20807 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.13■□□□□ 0.97
CAPN3P20807 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.13■□□□□ 0.97
CAPN3P20807 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CAPN3P20807 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.13■□□□□ 0.97
CAPN3P20807 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CAPN3P20807 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN3P20807 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.12■□□□□ 0.97
CAPN3P20807 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN3P20807 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.12■□□□□ 0.97
CAPN3P20807 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN3P20807 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN3P20807 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.12■□□□□ 0.97
CAPN3P20807 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN3P20807 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN3P20807 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CAPN3P20807 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN3P20807 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN3P20807 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN3P20807 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN3P20807 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN3P20807 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.11■□□□□ 0.97
CAPN3P20807 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.11■□□□□ 0.97
CAPN3P20807 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN3P20807 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN3P20807 BX664725.1-201ENST00000438252 379 ntBASIC21.11■□□□□ 0.97
CAPN3P20807 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.11■□□□□ 0.97
CAPN3P20807 SNX5-217ENST00000606557 1087 ntBASIC21.11■□□□□ 0.97
CAPN3P20807 MIR4787-201ENST00000607364 84 ntBASIC21.11■□□□□ 0.97
CAPN3P20807 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN3P20807 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN3P20807 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.1■□□□□ 0.97
CAPN3P20807 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.1■□□□□ 0.97
CAPN3P20807 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN3P20807 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN3P20807 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.1■□□□□ 0.97
CAPN3P20807 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN3P20807 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CAPN3P20807 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.1■□□□□ 0.97
CAPN3P20807 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CAPN3P20807 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.1■□□□□ 0.97
CAPN3P20807 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CAPN3P20807 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN3P20807 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN3P20807 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN3P20807 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN3P20807 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN3P20807 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN3P20807 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN3P20807 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN3P20807 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN3P20807 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.09■□□□□ 0.97
CAPN3P20807 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.09■□□□□ 0.97
CAPN3P20807 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.09■□□□□ 0.97
CAPN3P20807 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN3P20807 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN3P20807 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CAPN3P20807 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN3P20807 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.08■□□□□ 0.97
CAPN3P20807 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CAPN3P20807 AL024507.2-201ENST00000606070 2574 ntBASIC21.08■□□□□ 0.97
CAPN3P20807 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CAPN3P20807 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CAPN3P20807 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CAPN3P20807 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CAPN3P20807 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.08■□□□□ 0.97
CAPN3P20807 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
CAPN3P20807 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
CAPN3P20807 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CAPN3P20807 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CAPN3P20807 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN3P20807 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CAPN3P20807 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN3P20807 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN3P20807 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.07■□□□□ 0.96
CAPN3P20807 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN3P20807 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.07■□□□□ 0.96
CAPN3P20807 KRT16P3-201ENST00000439127 1283 ntBASIC21.07■□□□□ 0.96
CAPN3P20807 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.07■□□□□ 0.96
CAPN3P20807 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN3P20807 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN3P20807 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN3P20807 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN3P20807 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.07■□□□□ 0.96
CAPN3P20807 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN3P20807 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CAPN3P20807 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CAPN3P20807 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CAPN3P20807 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CAPN3P20807 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CAPN3P20807 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CAPN3P20807 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.05■□□□□ 0.96
CAPN3P20807 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CAPN3P20807 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.05■□□□□ 0.96
CAPN3P20807 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CAPN3P20807 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms