Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC27.37■■□□□ 1.97
COL11A2P13942 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC27.37■■□□□ 1.97
COL11A2P13942 MAZ-216ENST00000616501 991 ntTSL 5 BASIC27.37■■□□□ 1.97
COL11A2P13942 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
COL11A2P13942 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
COL11A2P13942 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
COL11A2P13942 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
COL11A2P13942 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
COL11A2P13942 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC27.36■■□□□ 1.97
COL11A2P13942 AC066615.1-201ENST00000640911 628 ntBASIC27.36■■□□□ 1.97
COL11A2P13942 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
COL11A2P13942 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
COL11A2P13942 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
COL11A2P13942 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
COL11A2P13942 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
COL11A2P13942 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
COL11A2P13942 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC27.36■■□□□ 1.97
COL11A2P13942 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
COL11A2P13942 KRT18P11-201ENST00000435214 1283 ntBASIC27.36■■□□□ 1.97
COL11A2P13942 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
COL11A2P13942 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC27.36■■□□□ 1.97
COL11A2P13942 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC27.36■■□□□ 1.97
COL11A2P13942 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC27.36■■□□□ 1.97
COL11A2P13942 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
COL11A2P13942 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
COL11A2P13942 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
COL11A2P13942 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC27.35■■□□□ 1.97
COL11A2P13942 EI24-211ENST00000534546 1544 ntTSL 2 BASIC27.35■■□□□ 1.97
COL11A2P13942 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC27.35■■□□□ 1.97
COL11A2P13942 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
COL11A2P13942 UBE2DNL-204ENST00000602536 740 ntBASIC27.35■■□□□ 1.97
COL11A2P13942 CPT2-209ENST00000636935 803 ntTSL 5 BASIC27.35■■□□□ 1.97
COL11A2P13942 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
COL11A2P13942 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
COL11A2P13942 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
COL11A2P13942 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC27.35■■□□□ 1.97
COL11A2P13942 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC27.34■■□□□ 1.97
COL11A2P13942 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
COL11A2P13942 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
COL11A2P13942 METTL26-203ENST00000397664 604 ntTSL 2 BASIC27.34■■□□□ 1.97
COL11A2P13942 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
COL11A2P13942 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC27.34■■□□□ 1.97
COL11A2P13942 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC27.34■■□□□ 1.97
COL11A2P13942 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
COL11A2P13942 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
COL11A2P13942 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
COL11A2P13942 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC27.34■■□□□ 1.97
COL11A2P13942 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
COL11A2P13942 GPX1P1-201ENST00000388829 606 ntBASIC27.33■■□□□ 1.97
COL11A2P13942 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
COL11A2P13942 CD99P1-205ENST00000527459 561 ntBASIC27.33■■□□□ 1.97
COL11A2P13942 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC27.33■■□□□ 1.97
COL11A2P13942 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
COL11A2P13942 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
COL11A2P13942 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC27.33■■□□□ 1.97
COL11A2P13942 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
COL11A2P13942 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
COL11A2P13942 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.96
COL11A2P13942 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
COL11A2P13942 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL11A2P13942 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
COL11A2P13942 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL11A2P13942 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
COL11A2P13942 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC27.32■■□□□ 1.96
COL11A2P13942 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC27.32■■□□□ 1.96
COL11A2P13942 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
COL11A2P13942 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
COL11A2P13942 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC27.31■■□□□ 1.96
COL11A2P13942 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
COL11A2P13942 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC27.31■■□□□ 1.96
COL11A2P13942 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
COL11A2P13942 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
COL11A2P13942 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC27.31■■□□□ 1.96
COL11A2P13942 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC27.3■■□□□ 1.96
COL11A2P13942 AC079140.4-201ENST00000507448 529 ntBASIC27.3■■□□□ 1.96
COL11A2P13942 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC27.3■■□□□ 1.96
COL11A2P13942 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
COL11A2P13942 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
COL11A2P13942 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
COL11A2P13942 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
COL11A2P13942 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
COL11A2P13942 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
COL11A2P13942 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
COL11A2P13942 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
COL11A2P13942 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC27.3■■□□□ 1.96
COL11A2P13942 TESC-206ENST00000541210 936 ntTSL 3 BASIC27.3■■□□□ 1.96
COL11A2P13942 KRT18P6-201ENST00000555540 1265 ntBASIC27.3■■□□□ 1.96
COL11A2P13942 TMEM191A-211ENST00000637163 1067 ntBASIC27.3■■□□□ 1.96
COL11A2P13942 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC27.3■■□□□ 1.96
COL11A2P13942 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC27.29■■□□□ 1.96
COL11A2P13942 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC27.29■■□□□ 1.96
COL11A2P13942 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL11A2P13942 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL11A2P13942 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL11A2P13942 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL11A2P13942 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
COL11A2P13942 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC27.29■■□□□ 1.96
COL11A2P13942 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC27.29■■□□□ 1.96
COL11A2P13942 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC27.29■■□□□ 1.96
COL11A2P13942 AC104187.1-201ENST00000607510 612 ntBASIC27.29■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms