Protein–RNA interactions for Protein: P08559

PDHA1, Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDHA1P08559 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PDHA1P08559 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
PDHA1P08559 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.48■■□□□ 1.19
PDHA1P08559 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.48■■□□□ 1.19
PDHA1P08559 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PDHA1P08559 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.48■■□□□ 1.19
PDHA1P08559 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.48■■□□□ 1.19
PDHA1P08559 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.48■■□□□ 1.19
PDHA1P08559 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
PDHA1P08559 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
PDHA1P08559 DUSP8P3-201ENST00000399571 1760 ntBASIC22.48■■□□□ 1.19
PDHA1P08559 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.48■■□□□ 1.19
PDHA1P08559 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
PDHA1P08559 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDHA1P08559 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDHA1P08559 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.47■■□□□ 1.19
PDHA1P08559 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.47■■□□□ 1.19
PDHA1P08559 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.47■■□□□ 1.19
PDHA1P08559 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.47■■□□□ 1.19
PDHA1P08559 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.47■■□□□ 1.19
PDHA1P08559 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDHA1P08559 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PDHA1P08559 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDHA1P08559 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDHA1P08559 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.46■■□□□ 1.19
PDHA1P08559 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
PDHA1P08559 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PDHA1P08559 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
PDHA1P08559 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.46■■□□□ 1.19
PDHA1P08559 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDHA1P08559 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.46■■□□□ 1.19
PDHA1P08559 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDHA1P08559 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDHA1P08559 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PDHA1P08559 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
PDHA1P08559 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.46■■□□□ 1.19
PDHA1P08559 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
PDHA1P08559 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
PDHA1P08559 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
PDHA1P08559 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
PDHA1P08559 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PDHA1P08559 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDHA1P08559 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.45■■□□□ 1.18
PDHA1P08559 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.45■■□□□ 1.18
PDHA1P08559 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.45■■□□□ 1.18
PDHA1P08559 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDHA1P08559 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDHA1P08559 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.45■■□□□ 1.18
PDHA1P08559 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
PDHA1P08559 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.45■■□□□ 1.18
PDHA1P08559 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
PDHA1P08559 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDHA1P08559 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDHA1P08559 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDHA1P08559 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.44■■□□□ 1.18
PDHA1P08559 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PDHA1P08559 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PDHA1P08559 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDHA1P08559 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.44■■□□□ 1.18
PDHA1P08559 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDHA1P08559 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.44■■□□□ 1.18
PDHA1P08559 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDHA1P08559 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
PDHA1P08559 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.44■■□□□ 1.18
PDHA1P08559 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
PDHA1P08559 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.44■■□□□ 1.18
PDHA1P08559 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.44■■□□□ 1.18
PDHA1P08559 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.44■■□□□ 1.18
PDHA1P08559 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDHA1P08559 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.43■■□□□ 1.18
PDHA1P08559 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PDHA1P08559 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PDHA1P08559 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDHA1P08559 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDHA1P08559 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDHA1P08559 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDHA1P08559 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDHA1P08559 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDHA1P08559 UNC93B3-201ENST00000308076 687 ntBASIC22.43■■□□□ 1.18
PDHA1P08559 SERBP1P1-201ENST00000396021 1160 ntBASIC22.43■■□□□ 1.18
PDHA1P08559 AC096631.2-201ENST00000436136 790 ntBASIC22.43■■□□□ 1.18
PDHA1P08559 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.43■■□□□ 1.18
PDHA1P08559 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.43■■□□□ 1.18
PDHA1P08559 AC092171.4-201ENST00000609130 632 ntBASIC22.43■■□□□ 1.18
PDHA1P08559 SLC25A24-204ENST00000569674 2357 ntBASIC22.43■■□□□ 1.18
PDHA1P08559 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDHA1P08559 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDHA1P08559 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDHA1P08559 SYT6-210ENST00000641643 1587 ntBASIC22.42■■□□□ 1.18
PDHA1P08559 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PDHA1P08559 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.42■■□□□ 1.18
PDHA1P08559 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PDHA1P08559 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PDHA1P08559 MIR3181-201ENST00000578512 73 ntBASIC22.42■■□□□ 1.18
PDHA1P08559 pRNA.6-201ENST00000610482 90 ntBASIC22.42■■□□□ 1.18
PDHA1P08559 pRNA.5-201ENST00000612139 90 ntBASIC22.42■■□□□ 1.18
PDHA1P08559 pRNA.11-201ENST00000618423 90 ntBASIC22.42■■□□□ 1.18
PDHA1P08559 pRNA.13-201ENST00000619112 90 ntBASIC22.42■■□□□ 1.18
PDHA1P08559 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.42■■□□□ 1.18
PDHA1P08559 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms