Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCCBP05166 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCCBP05166 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCCBP05166 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.81■■□□□ 1.08
PCCBP05166 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCCBP05166 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCCBP05166 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCCBP05166 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCCBP05166 AC012414.1-201ENST00000556676 535 ntBASIC21.81■■□□□ 1.08
PCCBP05166 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCCBP05166 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.81■■□□□ 1.08
PCCBP05166 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCCBP05166 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCCBP05166 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.8■■□□□ 1.08
PCCBP05166 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCCBP05166 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCCBP05166 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCCBP05166 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.8■■□□□ 1.08
PCCBP05166 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCCBP05166 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCCBP05166 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.8■■□□□ 1.08
PCCBP05166 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCCBP05166 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.8■■□□□ 1.08
PCCBP05166 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.8■■□□□ 1.08
PCCBP05166 AL358852.1-201ENST00000623174 1268 ntBASIC21.8■■□□□ 1.08
PCCBP05166 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCCBP05166 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCCBP05166 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.8■■□□□ 1.08
PCCBP05166 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.79■■□□□ 1.08
PCCBP05166 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCCBP05166 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCCBP05166 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCCBP05166 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.79■■□□□ 1.08
PCCBP05166 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.79■■□□□ 1.08
PCCBP05166 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.79■■□□□ 1.08
PCCBP05166 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCCBP05166 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCCBP05166 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
PCCBP05166 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
PCCBP05166 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PCCBP05166 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCCBP05166 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCCBP05166 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.79■■□□□ 1.08
PCCBP05166 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.78■■□□□ 1.08
PCCBP05166 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCCBP05166 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCCBP05166 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCCBP05166 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCCBP05166 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCCBP05166 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCCBP05166 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.78■■□□□ 1.08
PCCBP05166 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.78■■□□□ 1.08
PCCBP05166 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCCBP05166 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.78■■□□□ 1.08
PCCBP05166 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.78■■□□□ 1.08
PCCBP05166 AC105233.4-201ENST00000642045 216 ntBASIC21.78■■□□□ 1.08
PCCBP05166 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCCBP05166 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
PCCBP05166 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCCBP05166 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
PCCBP05166 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PCCBP05166 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCCBP05166 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.77■■□□□ 1.08
PCCBP05166 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.77■■□□□ 1.08
PCCBP05166 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PCCBP05166 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.77■■□□□ 1.08
PCCBP05166 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.77■■□□□ 1.08
PCCBP05166 AL354811.1-201ENST00000610286 706 ntBASIC21.77■■□□□ 1.08
PCCBP05166 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.77■■□□□ 1.08
PCCBP05166 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCCBP05166 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.77■■□□□ 1.08
PCCBP05166 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCCBP05166 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCCBP05166 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCCBP05166 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCCBP05166 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.76■■□□□ 1.07
PCCBP05166 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCCBP05166 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCCBP05166 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCCBP05166 AC087239.1-201ENST00000622671 572 ntBASIC21.76■■□□□ 1.07
PCCBP05166 AL031602.1-201ENST00000633169 911 ntBASIC21.76■■□□□ 1.07
PCCBP05166 AC068587.7-201ENST00000641602 218 ntBASIC21.76■■□□□ 1.07
PCCBP05166 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PCCBP05166 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.76■■□□□ 1.07
PCCBP05166 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCCBP05166 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.75■■□□□ 1.07
PCCBP05166 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCCBP05166 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.75■■□□□ 1.07
PCCBP05166 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCCBP05166 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCCBP05166 DUSP8P3-201ENST00000399571 1760 ntBASIC21.75■■□□□ 1.07
PCCBP05166 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCCBP05166 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCCBP05166 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.75■■□□□ 1.07
PCCBP05166 YBX1P1-201ENST00000445822 960 ntBASIC21.75■■□□□ 1.07
PCCBP05166 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.75■■□□□ 1.07
PCCBP05166 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.75■■□□□ 1.07
PCCBP05166 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.75■■□□□ 1.07
PCCBP05166 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.75■■□□□ 1.07
PCCBP05166 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms