Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
HLA-DPB1P04440 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DPB1P04440 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
HLA-DPB1P04440 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.7■□□□□ 0.74
HLA-DPB1P04440 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HLA-DPB1P04440 AC131274.2-201ENST00000580697 1507 ntBASIC19.7■□□□□ 0.74
HLA-DPB1P04440 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.7■□□□□ 0.74
HLA-DPB1P04440 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.7■□□□□ 0.74
HLA-DPB1P04440 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HLA-DPB1P04440 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HLA-DPB1P04440 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DPB1P04440 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.69■□□□□ 0.74
HLA-DPB1P04440 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.69■□□□□ 0.74
HLA-DPB1P04440 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.69■□□□□ 0.74
HLA-DPB1P04440 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.69■□□□□ 0.74
HLA-DPB1P04440 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.69■□□□□ 0.74
HLA-DPB1P04440 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DPB1P04440 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DPB1P04440 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DPB1P04440 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DPB1P04440 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HLA-DPB1P04440 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
HLA-DPB1P04440 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DPB1P04440 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DPB1P04440 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
HLA-DPB1P04440 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.68■□□□□ 0.74
HLA-DPB1P04440 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.68■□□□□ 0.74
HLA-DPB1P04440 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.68■□□□□ 0.74
HLA-DPB1P04440 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.68■□□□□ 0.74
HLA-DPB1P04440 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DPB1P04440 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DPB1P04440 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.68■□□□□ 0.74
HLA-DPB1P04440 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.68■□□□□ 0.74
HLA-DPB1P04440 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HLA-DPB1P04440 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HLA-DPB1P04440 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DPB1P04440 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DPB1P04440 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
HLA-DPB1P04440 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DPB1P04440 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HLA-DPB1P04440 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
HLA-DPB1P04440 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DPB1P04440 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DPB1P04440 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DPB1P04440 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DPB1P04440 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.67■□□□□ 0.74
HLA-DPB1P04440 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DPB1P04440 AC009299.2-201ENST00000482477 511 ntBASIC19.67■□□□□ 0.74
HLA-DPB1P04440 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DPB1P04440 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HLA-DPB1P04440 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HLA-DPB1P04440 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HLA-DPB1P04440 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DPB1P04440 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HLA-DPB1P04440 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DPB1P04440 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HLA-DPB1P04440 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DPB1P04440 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DPB1P04440 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
HLA-DPB1P04440 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DPB1P04440 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.66■□□□□ 0.74
HLA-DPB1P04440 AC137630.3-201ENST00000607245 391 ntBASIC19.66■□□□□ 0.74
HLA-DPB1P04440 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DPB1P04440 AC080038.3-201ENST00000623346 1952 ntBASIC19.66■□□□□ 0.74
HLA-DPB1P04440 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DPB1P04440 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HLA-DPB1P04440 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DPB1P04440 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DPB1P04440 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DPB1P04440 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DPB1P04440 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HLA-DPB1P04440 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.65■□□□□ 0.74
HLA-DPB1P04440 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DPB1P04440 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DPB1P04440 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DPB1P04440 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DPB1P04440 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.65■□□□□ 0.74
HLA-DPB1P04440 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.65■□□□□ 0.74
HLA-DPB1P04440 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HLA-DPB1P04440 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HLA-DPB1P04440 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DPB1P04440 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HLA-DPB1P04440 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
HLA-DPB1P04440 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.64■□□□□ 0.73
HLA-DPB1P04440 BX664725.1-201ENST00000438252 379 ntBASIC19.64■□□□□ 0.73
HLA-DPB1P04440 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DPB1P04440 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.64■□□□□ 0.73
HLA-DPB1P04440 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DPB1P04440 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DPB1P04440 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.64■□□□□ 0.73
HLA-DPB1P04440 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.64■□□□□ 0.73
HLA-DPB1P04440 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DPB1P04440 AL353803.4-201ENST00000565882 1934 ntBASIC19.64■□□□□ 0.73
HLA-DPB1P04440 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DPB1P04440 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
HLA-DPB1P04440 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.64■□□□□ 0.73
HLA-DPB1P04440 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.64■□□□□ 0.73
HLA-DPB1P04440 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
HLA-DPB1P04440 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DPB1P04440 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms