Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LCATP04180 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LCATP04180 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LCATP04180 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LCATP04180 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LCATP04180 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LCATP04180 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.16■□□□□ 0.66
LCATP04180 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.16■□□□□ 0.66
LCATP04180 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.16■□□□□ 0.66
LCATP04180 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LCATP04180 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LCATP04180 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
LCATP04180 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LCATP04180 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LCATP04180 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.15■□□□□ 0.66
LCATP04180 GUSBP5-202ENST00000510805 1989 ntBASIC19.15■□□□□ 0.66
LCATP04180 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LCATP04180 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.15■□□□□ 0.66
LCATP04180 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.15■□□□□ 0.66
LCATP04180 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.15■□□□□ 0.66
LCATP04180 SRD5A1P1-201ENST00000442297 786 ntBASIC19.15■□□□□ 0.66
LCATP04180 AC099791.2-201ENST00000605725 427 ntBASIC19.15■□□□□ 0.66
LCATP04180 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.15■□□□□ 0.66
LCATP04180 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LCATP04180 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
LCATP04180 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LCATP04180 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LCATP04180 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
LCATP04180 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.14■□□□□ 0.66
LCATP04180 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
LCATP04180 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
LCATP04180 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LCATP04180 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LCATP04180 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
LCATP04180 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.14■□□□□ 0.65
LCATP04180 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LCATP04180 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LCATP04180 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.14■□□□□ 0.65
LCATP04180 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.14■□□□□ 0.65
LCATP04180 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.14■□□□□ 0.65
LCATP04180 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.14■□□□□ 0.65
LCATP04180 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LCATP04180 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LCATP04180 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LCATP04180 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
LCATP04180 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LCATP04180 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.14■□□□□ 0.65
LCATP04180 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LCATP04180 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LCATP04180 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LCATP04180 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LCATP04180 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.13■□□□□ 0.65
LCATP04180 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.13■□□□□ 0.65
LCATP04180 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.13■□□□□ 0.65
LCATP04180 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.13■□□□□ 0.65
LCATP04180 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LCATP04180 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LCATP04180 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LCATP04180 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LCATP04180 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LCATP04180 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LCATP04180 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
LCATP04180 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LCATP04180 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LCATP04180 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LCATP04180 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
LCATP04180 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.12■□□□□ 0.65
LCATP04180 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
LCATP04180 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.12■□□□□ 0.65
LCATP04180 AC006455.2-201ENST00000429931 906 ntBASIC19.12■□□□□ 0.65
LCATP04180 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LCATP04180 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.12■□□□□ 0.65
LCATP04180 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.12■□□□□ 0.65
LCATP04180 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.12■□□□□ 0.65
LCATP04180 AL499627.2-201ENST00000606283 725 ntBASIC19.12■□□□□ 0.65
LCATP04180 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LCATP04180 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LCATP04180 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LCATP04180 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LCATP04180 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LCATP04180 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LCATP04180 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LCATP04180 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.11■□□□□ 0.65
LCATP04180 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
LCATP04180 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
LCATP04180 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.11■□□□□ 0.65
LCATP04180 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LCATP04180 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.11■□□□□ 0.65
LCATP04180 AL512631.2-201ENST00000604634 923 ntBASIC19.11■□□□□ 0.65
LCATP04180 pRNA.6-201ENST00000610482 90 ntBASIC19.11■□□□□ 0.65
LCATP04180 pRNA.5-201ENST00000612139 90 ntBASIC19.11■□□□□ 0.65
LCATP04180 pRNA.11-201ENST00000618423 90 ntBASIC19.11■□□□□ 0.65
LCATP04180 pRNA.13-201ENST00000619112 90 ntBASIC19.11■□□□□ 0.65
LCATP04180 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.11■□□□□ 0.65
LCATP04180 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.11■□□□□ 0.65
LCATP04180 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LCATP04180 LINC01960-201ENST00000563759 1884 ntBASIC19.11■□□□□ 0.65
LCATP04180 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LCATP04180 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
LCATP04180 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms