Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC13.97□□□□□ -0.17
APOBP04114 AL121832.2-201ENST00000610979 668 ntBASIC13.97□□□□□ -0.17
APOBP04114 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
APOBP04114 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
APOBP04114 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOBP04114 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
APOBP04114 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC13.96□□□□□ -0.17
APOBP04114 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC13.96□□□□□ -0.17
APOBP04114 AC083906.2-201ENST00000511578 360 ntBASIC13.96□□□□□ -0.17
APOBP04114 AC092118.2-201ENST00000613495 667 ntBASIC13.96□□□□□ -0.17
APOBP04114 AC144652.1-201ENST00000609974 1624 ntBASIC13.96□□□□□ -0.17
APOBP04114 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC13.96□□□□□ -0.17
APOBP04114 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
APOBP04114 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
APOBP04114 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
APOBP04114 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOBP04114 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC13.95□□□□□ -0.18
APOBP04114 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC13.95□□□□□ -0.18
APOBP04114 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOBP04114 MMAB-206ENST00000540016 945 ntTSL 3 BASIC13.95□□□□□ -0.18
APOBP04114 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC13.95□□□□□ -0.18
APOBP04114 KRT87P-202ENST00000534226 1464 ntBASIC13.95□□□□□ -0.18
APOBP04114 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOBP04114 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOBP04114 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOBP04114 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOBP04114 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOBP04114 SLC7A5P1-201ENST00000568957 537 ntBASIC13.95□□□□□ -0.18
APOBP04114 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOBP04114 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOBP04114 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOBP04114 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC13.95□□□□□ -0.18
APOBP04114 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOBP04114 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOBP04114 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOBP04114 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOBP04114 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOBP04114 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOBP04114 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOBP04114 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOBP04114 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOBP04114 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOBP04114 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
APOBP04114 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
APOBP04114 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC13.94□□□□□ -0.18
APOBP04114 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOBP04114 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC13.93□□□□□ -0.18
APOBP04114 APTR-203ENST00000430801 583 ntTSL 5 BASIC13.93□□□□□ -0.18
APOBP04114 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APOBP04114 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APOBP04114 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC13.93□□□□□ -0.18
APOBP04114 POU5F1P3-201ENST00000428824 1078 ntBASIC13.93□□□□□ -0.18
APOBP04114 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
APOBP04114 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
APOBP04114 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APOBP04114 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
APOBP04114 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOBP04114 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOBP04114 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APOBP04114 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOBP04114 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOBP04114 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
APOBP04114 TESC-206ENST00000541210 936 ntTSL 3 BASIC13.92□□□□□ -0.18
APOBP04114 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC13.92□□□□□ -0.18
APOBP04114 ITM2C-210ENST00000620962 501 ntBASIC13.92□□□□□ -0.18
APOBP04114 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOBP04114 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOBP04114 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
APOBP04114 AF201337.1-201ENST00000520239 748 ntBASIC13.92□□□□□ -0.18
APOBP04114 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APOBP04114 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC13.92□□□□□ -0.18
APOBP04114 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC13.92□□□□□ -0.18
APOBP04114 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APOBP04114 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOBP04114 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC13.91□□□□□ -0.18
APOBP04114 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC13.91□□□□□ -0.18
APOBP04114 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOBP04114 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOBP04114 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOBP04114 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
APOBP04114 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOBP04114 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC13.91□□□□□ -0.18
APOBP04114 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC13.91□□□□□ -0.18
APOBP04114 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOBP04114 AC105036.2-201ENST00000569468 176 ntBASIC13.91□□□□□ -0.18
APOBP04114 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC13.91□□□□□ -0.18
APOBP04114 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOBP04114 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOBP04114 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
APOBP04114 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOBP04114 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOBP04114 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
APOBP04114 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOBP04114 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC13.91□□□□□ -0.18
APOBP04114 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
APOBP04114 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
APOBP04114 EI24-213ENST00000618552 1747 ntTSL 5 BASIC13.91□□□□□ -0.18
APOBP04114 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC13.91□□□□□ -0.18
APOBP04114 DUSP5P2-201ENST00000426873 1033 ntBASIC13.91□□□□□ -0.18
APOBP04114 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms