Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
MT-CO1P00395 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.51■■□□□ 1.19
MT-CO1P00395 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
MT-CO1P00395 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.51■■□□□ 1.19
MT-CO1P00395 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
MT-CO1P00395 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
MT-CO1P00395 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.51■■□□□ 1.19
MT-CO1P00395 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
MT-CO1P00395 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.5■■□□□ 1.19
MT-CO1P00395 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
MT-CO1P00395 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
MT-CO1P00395 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
MT-CO1P00395 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.5■■□□□ 1.19
MT-CO1P00395 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
MT-CO1P00395 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.5■■□□□ 1.19
MT-CO1P00395 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.5■■□□□ 1.19
MT-CO1P00395 AC126544.1-201ENST00000580842 1059 ntBASIC22.5■■□□□ 1.19
MT-CO1P00395 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
MT-CO1P00395 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
MT-CO1P00395 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MT-CO1P00395 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MT-CO1P00395 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
MT-CO1P00395 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MT-CO1P00395 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
MT-CO1P00395 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
MT-CO1P00395 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
MT-CO1P00395 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
MT-CO1P00395 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.49■■□□□ 1.19
MT-CO1P00395 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.49■■□□□ 1.19
MT-CO1P00395 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.49■■□□□ 1.19
MT-CO1P00395 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.49■■□□□ 1.19
MT-CO1P00395 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
MT-CO1P00395 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
MT-CO1P00395 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
MT-CO1P00395 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
MT-CO1P00395 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
MT-CO1P00395 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
MT-CO1P00395 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
MT-CO1P00395 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
MT-CO1P00395 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
MT-CO1P00395 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
MT-CO1P00395 DUSP8P5-201ENST00000422884 1815 ntBASIC22.48■■□□□ 1.19
MT-CO1P00395 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.48■■□□□ 1.19
MT-CO1P00395 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
MT-CO1P00395 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
MT-CO1P00395 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.48■■□□□ 1.19
MT-CO1P00395 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
MT-CO1P00395 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
MT-CO1P00395 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
MT-CO1P00395 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
MT-CO1P00395 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
MT-CO1P00395 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
MT-CO1P00395 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
MT-CO1P00395 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
MT-CO1P00395 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
MT-CO1P00395 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.46■■□□□ 1.19
MT-CO1P00395 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
MT-CO1P00395 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
MT-CO1P00395 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
MT-CO1P00395 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.46■■□□□ 1.19
MT-CO1P00395 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
MT-CO1P00395 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
MT-CO1P00395 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
MT-CO1P00395 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
MT-CO1P00395 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
MT-CO1P00395 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
MT-CO1P00395 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
MT-CO1P00395 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
MT-CO1P00395 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
MT-CO1P00395 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
MT-CO1P00395 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
MT-CO1P00395 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
MT-CO1P00395 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.45■■□□□ 1.18
MT-CO1P00395 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.45■■□□□ 1.18
MT-CO1P00395 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.45■■□□□ 1.18
MT-CO1P00395 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
MT-CO1P00395 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
MT-CO1P00395 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.45■■□□□ 1.18
MT-CO1P00395 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
MT-CO1P00395 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
MT-CO1P00395 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
MT-CO1P00395 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
MT-CO1P00395 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.45■■□□□ 1.18
MT-CO1P00395 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
MT-CO1P00395 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
MT-CO1P00395 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
MT-CO1P00395 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
MT-CO1P00395 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
MT-CO1P00395 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
MT-CO1P00395 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
MT-CO1P00395 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
MT-CO1P00395 DUSP8P3-201ENST00000399571 1760 ntBASIC22.44■■□□□ 1.18
MT-CO1P00395 TSPY26P-201ENST00000476365 1326 ntBASIC22.44■■□□□ 1.18
MT-CO1P00395 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.44■■□□□ 1.18
MT-CO1P00395 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
MT-CO1P00395 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.44■■□□□ 1.18
MT-CO1P00395 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
MT-CO1P00395 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
MT-CO1P00395 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
MT-CO1P00395 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms