Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 OR2A1-AS1-204ENST00000470435 602 ntBASIC22.2■■□□□ 1.14
USP1O94782 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.2■■□□□ 1.14
USP1O94782 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.2■■□□□ 1.14
USP1O94782 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.2■■□□□ 1.14
USP1O94782 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
USP1O94782 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
USP1O94782 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
USP1O94782 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
USP1O94782 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
USP1O94782 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
USP1O94782 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.19■■□□□ 1.14
USP1O94782 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.19■■□□□ 1.14
USP1O94782 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.19■■□□□ 1.14
USP1O94782 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
USP1O94782 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
USP1O94782 AC080038.3-201ENST00000623346 1952 ntBASIC22.19■■□□□ 1.14
USP1O94782 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
USP1O94782 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
USP1O94782 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
USP1O94782 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
USP1O94782 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
USP1O94782 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
USP1O94782 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.18■■□□□ 1.14
USP1O94782 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
USP1O94782 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
USP1O94782 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
USP1O94782 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
USP1O94782 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
USP1O94782 UNC93B8-201ENST00000511903 705 ntBASIC22.18■■□□□ 1.14
USP1O94782 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
USP1O94782 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.18■■□□□ 1.14
USP1O94782 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
USP1O94782 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.18■■□□□ 1.14
USP1O94782 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.18■■□□□ 1.14
USP1O94782 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
USP1O94782 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
USP1O94782 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.18■■□□□ 1.14
USP1O94782 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
USP1O94782 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.17■■□□□ 1.14
USP1O94782 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
USP1O94782 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
USP1O94782 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.17■■□□□ 1.14
USP1O94782 GUSBP5-201ENST00000418136 578 ntBASIC22.17■■□□□ 1.14
USP1O94782 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
USP1O94782 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.17■■□□□ 1.14
USP1O94782 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.17■■□□□ 1.14
USP1O94782 MIR6724-1-201ENST00000616420 92 ntBASIC22.17■■□□□ 1.14
USP1O94782 MIR6724-2-201ENST00000616483 92 ntBASIC22.17■■□□□ 1.14
USP1O94782 MIR6724-4-201ENST00000617390 92 ntBASIC22.17■■□□□ 1.14
USP1O94782 MIR6724-3-201ENST00000622482 92 ntBASIC22.17■■□□□ 1.14
USP1O94782 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
USP1O94782 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
USP1O94782 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
USP1O94782 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.17■■□□□ 1.14
USP1O94782 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.17■■□□□ 1.14
USP1O94782 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
USP1O94782 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
USP1O94782 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
USP1O94782 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
USP1O94782 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
USP1O94782 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
USP1O94782 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
USP1O94782 AC092053.2-201ENST00000640557 1818 ntBASIC22.16■■□□□ 1.14
USP1O94782 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.16■■□□□ 1.14
USP1O94782 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
USP1O94782 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
USP1O94782 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
USP1O94782 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
USP1O94782 LINC01960-201ENST00000563759 1884 ntBASIC22.15■■□□□ 1.14
USP1O94782 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
USP1O94782 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.15■■□□□ 1.14
USP1O94782 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
USP1O94782 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.15■■□□□ 1.14
USP1O94782 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.15■■□□□ 1.14
USP1O94782 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
USP1O94782 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
USP1O94782 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
USP1O94782 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
USP1O94782 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
USP1O94782 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
USP1O94782 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
USP1O94782 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.14■■□□□ 1.13
USP1O94782 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.14■■□□□ 1.13
USP1O94782 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.14■■□□□ 1.13
USP1O94782 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
USP1O94782 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
USP1O94782 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.14■■□□□ 1.13
USP1O94782 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
USP1O94782 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
USP1O94782 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
USP1O94782 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
USP1O94782 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.13■■□□□ 1.13
USP1O94782 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
USP1O94782 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
USP1O94782 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.13■■□□□ 1.13
USP1O94782 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.13■■□□□ 1.13
USP1O94782 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.13■■□□□ 1.13
USP1O94782 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
USP1O94782 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
USP1O94782 AC004687.1-201ENST00000579003 1625 ntBASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms