Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 SLC25A24-204ENST00000569674 2357 ntBASIC21.69■■□□□ 1.06
SUPT3HO75486 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SUPT3HO75486 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SUPT3HO75486 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SUPT3HO75486 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.68■■□□□ 1.06
SUPT3HO75486 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SUPT3HO75486 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.68■■□□□ 1.06
SUPT3HO75486 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.68■■□□□ 1.06
SUPT3HO75486 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SUPT3HO75486 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.68■■□□□ 1.06
SUPT3HO75486 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.68■■□□□ 1.06
SUPT3HO75486 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SUPT3HO75486 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.68■■□□□ 1.06
SUPT3HO75486 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
SUPT3HO75486 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SUPT3HO75486 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
SUPT3HO75486 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.67■■□□□ 1.06
SUPT3HO75486 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SUPT3HO75486 DUX4L4-201ENST00000566884 1269 ntBASIC21.67■■□□□ 1.06
SUPT3HO75486 AC009086.3-201ENST00000623486 1008 ntBASIC21.67■■□□□ 1.06
SUPT3HO75486 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SUPT3HO75486 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SUPT3HO75486 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SUPT3HO75486 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SUPT3HO75486 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SUPT3HO75486 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SUPT3HO75486 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SUPT3HO75486 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SUPT3HO75486 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SUPT3HO75486 LINC00565-201ENST00000562710 2331 ntBASIC21.66■■□□□ 1.06
SUPT3HO75486 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SUPT3HO75486 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.66■■□□□ 1.06
SUPT3HO75486 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SUPT3HO75486 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
SUPT3HO75486 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.66■■□□□ 1.06
SUPT3HO75486 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SUPT3HO75486 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SUPT3HO75486 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.65■■□□□ 1.06
SUPT3HO75486 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SUPT3HO75486 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SUPT3HO75486 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SUPT3HO75486 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SUPT3HO75486 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SUPT3HO75486 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SUPT3HO75486 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.65■■□□□ 1.06
SUPT3HO75486 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SUPT3HO75486 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.65■■□□□ 1.06
SUPT3HO75486 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.65■■□□□ 1.06
SUPT3HO75486 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SUPT3HO75486 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SUPT3HO75486 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SUPT3HO75486 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SUPT3HO75486 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.06
SUPT3HO75486 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SUPT3HO75486 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SUPT3HO75486 AC087742.1-201ENST00000575880 1738 ntBASIC21.64■■□□□ 1.06
SUPT3HO75486 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
SUPT3HO75486 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.64■■□□□ 1.05
SUPT3HO75486 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SUPT3HO75486 UNC93B8-201ENST00000511903 705 ntBASIC21.64■■□□□ 1.05
SUPT3HO75486 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SUPT3HO75486 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SUPT3HO75486 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SUPT3HO75486 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SUPT3HO75486 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SUPT3HO75486 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SUPT3HO75486 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SUPT3HO75486 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SUPT3HO75486 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.63■■□□□ 1.05
SUPT3HO75486 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SUPT3HO75486 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.63■■□□□ 1.05
SUPT3HO75486 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
SUPT3HO75486 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SUPT3HO75486 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.63■■□□□ 1.05
SUPT3HO75486 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.63■■□□□ 1.05
SUPT3HO75486 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SUPT3HO75486 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SUPT3HO75486 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
SUPT3HO75486 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SUPT3HO75486 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SUPT3HO75486 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SUPT3HO75486 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SUPT3HO75486 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
SUPT3HO75486 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SUPT3HO75486 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SUPT3HO75486 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.62■■□□□ 1.05
SUPT3HO75486 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.62■■□□□ 1.05
SUPT3HO75486 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.62■■□□□ 1.05
SUPT3HO75486 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SUPT3HO75486 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SUPT3HO75486 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SUPT3HO75486 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SUPT3HO75486 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SUPT3HO75486 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SUPT3HO75486 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SUPT3HO75486 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SUPT3HO75486 AC080038.3-201ENST00000623346 1952 ntBASIC21.61■■□□□ 1.05
SUPT3HO75486 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SUPT3HO75486 C17orf82-201ENST00000623772 1530 ntBASIC21.61■■□□□ 1.05
SUPT3HO75486 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms