Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PFDN1O60925 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PFDN1O60925 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PFDN1O60925 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PFDN1O60925 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PFDN1O60925 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PFDN1O60925 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
PFDN1O60925 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PFDN1O60925 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PFDN1O60925 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PFDN1O60925 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PFDN1O60925 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PFDN1O60925 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.74■□□□□ 0.75
PFDN1O60925 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PFDN1O60925 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
PFDN1O60925 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PFDN1O60925 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PFDN1O60925 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PFDN1O60925 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PFDN1O60925 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.74■□□□□ 0.75
PFDN1O60925 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PFDN1O60925 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PFDN1O60925 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PFDN1O60925 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PFDN1O60925 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PFDN1O60925 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PFDN1O60925 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PFDN1O60925 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PFDN1O60925 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PFDN1O60925 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PFDN1O60925 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PFDN1O60925 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PFDN1O60925 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PFDN1O60925 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PFDN1O60925 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PFDN1O60925 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PFDN1O60925 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.73■□□□□ 0.75
PFDN1O60925 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PFDN1O60925 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PFDN1O60925 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PFDN1O60925 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PFDN1O60925 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PFDN1O60925 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PFDN1O60925 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PFDN1O60925 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PFDN1O60925 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PFDN1O60925 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PFDN1O60925 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PFDN1O60925 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PFDN1O60925 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PFDN1O60925 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PFDN1O60925 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.71■□□□□ 0.75
PFDN1O60925 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PFDN1O60925 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PFDN1O60925 AL031258.1-201ENST00000623562 325 ntBASIC19.71■□□□□ 0.75
PFDN1O60925 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PFDN1O60925 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PFDN1O60925 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PFDN1O60925 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.71■□□□□ 0.75
PFDN1O60925 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.7■□□□□ 0.74
PFDN1O60925 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PFDN1O60925 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.7■□□□□ 0.74
PFDN1O60925 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PFDN1O60925 AC135983.2-203ENST00000454486 1613 ntBASIC19.7■□□□□ 0.74
PFDN1O60925 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PFDN1O60925 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PFDN1O60925 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PFDN1O60925 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PFDN1O60925 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PFDN1O60925 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PFDN1O60925 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PFDN1O60925 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PFDN1O60925 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PFDN1O60925 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.69■□□□□ 0.74
PFDN1O60925 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.69■□□□□ 0.74
PFDN1O60925 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PFDN1O60925 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PFDN1O60925 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.69■□□□□ 0.74
PFDN1O60925 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
PFDN1O60925 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PFDN1O60925 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PFDN1O60925 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PFDN1O60925 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PFDN1O60925 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PFDN1O60925 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PFDN1O60925 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PFDN1O60925 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PFDN1O60925 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PFDN1O60925 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
PFDN1O60925 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
PFDN1O60925 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PFDN1O60925 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PFDN1O60925 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PFDN1O60925 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
PFDN1O60925 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
PFDN1O60925 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PFDN1O60925 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
PFDN1O60925 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PFDN1O60925 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PFDN1O60925 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms